Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pT7BBa_I719005 Version 1 (Component)T7 Promoter
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_I739002BBa_I739002 Version 1 (Component)Constitutive expression cassette for LacI +LVA (J23100.B0034.C0012.B0015)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
AdapterBBa_I732007 Version 1 (Component)BglII + BamHI
BBa_I739003BBa_I739003 Version 1 (Component)Constitutive expression cassette for LuxR (J23100.B0034.C0062.B0015)
BBa_I739007BBa_I739007 Version 1 (Component)Double regulated expression cassette for P22 cII +LVA (I739105.B0034.C0053.B0015)
BBa_I739006BBa_I739006 Version 1 (Component)Double regulated expression cassette for cI +LVA (I739104.B0034.C0051.B0015)
BBa_I739004BBa_I739004 Version 1 (Component)Double regulated intermediate for P22 cII +LVA (I739102.B0034.C0053)
BBa_I739008BBa_I739008 Version 1 (Component)Double regulated intermediate for cI +LVA (I739103.B0034.C0051)
BBa_I739009BBa_I739009 Version 1 (Component)Promoterless expression cassette for ECFP +LVA (B0034.E0022.B0015)
BBa_I739005BBa_I739005 Version 1 (Component)Promoterless expression cassette for EYFP +LVA (B0034.E0032.B0015)
BBa_I729007BBa_I729007 Version 1 (Component)Too sensitive LuxR
BBa_I729001BBa_I729001 Version 1 (Component)mutant LuxR (Sensitive)
BBa_I729006BBa_I729006 Version 1 (Component)AHL reporter and aiia device
BBa_I739018BBa_I739018 Version 1 (Component)Learning System (Composite of BBa_I739006 and BBa_I739007)
BBa_I719007BBa_I719007 Version 1 (Component)vanilla scent synthesizer (example)
BBa_I729002BBa_I729002 Version 1 (Component)Flagellin (Flic histag)
BBa_I739013BBa_I739013 Version 1 (Component)Composite of BBa_I739001, BBa_I739002 and BBa_I739003
BBa_I729005BBa_I729005 Version 1 (Component)AHL Reporter and Quencher
BBa_I729003BBa_I729003 Version 1 (Component)AHL receiver inverter aiiA
BBa_I729004BBa_I729004 Version 1 (Component)Sensitive AHL Receiver
BBa_I729008BBa_I729008 Version 1 (Component)Too Sensitive AHL Repoter
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
Default inBBa_I739400 Version 1 (Component)Default insert of plasmid BBa_I739201, BBa_I739202, BBa_I739204
c-MycBBa_I712007 Version 1 (Component)c-Myc affinity tag
BBa_I739012BBa_I739012 Version 1 (Component)Composite of BBa_I739002 and BBa_I739003
BBa_I739019BBa_I739019 Version 1 (Component)Composite of BBa_I739010 and BBa_I739011
BBa_I739017BBa_I739017 Version 1 (Component)Composite of BBa_I739015 and BBa_I739016
BBa_I739020BBa_I739020 Version 1 (Component)Composite of BBa_I739018 and BBa_I739019
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter