SynBioHub

Public

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

Public

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

Public

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

Public

BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)

Public

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

Public

BBa_I13453
BBa_I13453 Version 1 (Component)
Pbad promoter

Public

BBa_B0034_sequence
BBa_B0034_sequence Version 1 (Sequence)

Public

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

pBAD
BBa_K206000 Version 1 (Component)
pBAD strong

Public

BBa_K1415101
BBa_K1415101 Version 1 (Component)
Pcons+B0034+PBAN(Bombyx mori)

Public

BBa_K1415001
BBa_K1415001 Version 1 (Component)
PBAN (Bombyx mori)

Public

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

Public

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

Public

tetR
BBa_Q04400 Version 1 (Component)
QPI (B0034.C0040.B0015.R0040)

Public

BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)

Public

BBa_B0035
BBa_B0035 Version 1 (Component)
RBS (B0030 derivative)

Public

BBa_K1415201
BBa_K1415201 Version 1 (Component)
Pcons+B0034+PBAN(Bombyx mori)+B0034+BFP+J61048

Public

BBa_K2066527
BBa_K2066527 Version 1 (Component)
B0034 with scar TACTAG

Public

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

Public

Tamura
BBa_K1763444 Version 1 (Component)
Bombyx mori silk co-spinning module

Public

BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

Public

BBa_S0100
BBa_S0100 Version 1 (Component)
B0034.C0012

Public

BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

Public

BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

Public

BBa_K1415103
BBa_K1415103 Version 1 (Component)
Pcons+B0034+PBAN(Agrotis ipsilon)

Public

BBa_K1415105
BBa_K1415105 Version 1 (Component)
Pcons+B0034+PBAN(Spodoptera litura)

Public

BBa_K1415109
BBa_K1415109 Version 1 (Component)
Pcons+B0034+PBAN(Aedes aegypti)

Public

BBa_K1415104
BBa_K1415104 Version 1 (Component)
Pcons+B0034+PBAN(Lymantria dispar)

Public

BBa_K1415102
BBa_K1415102 Version 1 (Component)
Pcons+B0034+PBAN(Mamestra brassicae)

Public

BBa_K1415107
BBa_K1415107 Version 1 (Component)
Pcons+B0034+PBAN(Adoxophyes sp.)

Public

BBa_K1415108
BBa_K1415108 Version 1 (Component)
Pcons+B0034+PBAN(Solenopsis invicta)

Public

BBa_B0030_sequence
BBa_B0030_sequence Version 1 (Sequence)

Public

BBa_E0434
BBa_E0434 Version 1 (Component)
B0034.E0034.B0015

Public

BBa_K1415106
BBa_K1415106 Version 1 (Component)
Pcons+B0034+PBAN(Helicoverpa armigera Hubner )

Public

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

Public

BBa_S03518
BBa_S03518 Version 1 (Component)
B0034:C0040

Public

BBa_B0032_sequence
BBa_B0032_sequence Version 1 (Sequence)

Public

BBa_S03154
BBa_S03154 Version 1 (Component)
B0034.C0078

Public

pCon 0.36
BBa_K176009 Version 1 (Component)
constitutive promoter family member J23107 actual sequence (pCon 0.36)

Public

BBa_S03156
BBa_S03156 Version 1 (Component)
B0034.C0079

Public

pCon 0.15
BBa_K176008 Version 1 (Component)
constitutive promoter family member J23115 actual sequence (pCon 0.15)

Public

BBa_K208010
BBa_K208010 Version 1 (Component)
Lac Promoter (BBa_R0010) and RBS (B0034)

Public

BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)

Public

BBa_B0054
BBa_B0054 Version 1 (Component)
Transcriptional terminator

Public

BBa_K592016
BBa_K592016 Version 1 (Component)
B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS

Public

BBa_Q01121
BBa_Q01121 Version 1 (Component)
QPI (B0031.C0012.B0015.R0011)

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