SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_F2620
BBa_F2620 Version 1 (Component)
3OC₆HSL -> PoPS Receiver

BBa_P0440
BBa_P0440 Version 1 (Component)
PoPS -> TetR [S0151]

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

lox
BBa_J61046 Version 1 (Component)
[Lox] site for recombination

BBa_P0412
BBa_P0412 Version 1 (Component)
PoPS -> LacI [S0150]

Cre
BBa_J61047 Version 1 (Component)
Cre DNA recombinase

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_J37027
BBa_J37027 Version 1 (Component)
Pops Blocker (Cre/Lox system)

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_P0451
BBa_P0451 Version 1 (Component)
PoPS -> cI (lambda) [S0153]

BBa_K176028
BBa_K176028 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS

pRE
BBa_K116603 Version 1 (Component)
pRE promoter from &#955; phage

lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

pLux/Tet
BBa_K176000 Version 1 (Component)
pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS

BBa_P0140
BBa_P0140 Version 1 (Component)
PoPS -> TetR [S0163]

BBa_P0151
BBa_P0151 Version 1 (Component)
PoPS -> cI (lambda) [S0165]

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_K081012
BBa_K081012 Version 1 (Component)
GFP protein generator - PoPS->GFP

BBa_K176063
BBa_K176063 Version 1 (Component)
PoPS->RBS(weak)+lacZalpha-ccdB+T

BBa_K176062
BBa_K176062 Version 1 (Component)
PoPS->RBS(weak)+ccdB+T

BBa_P0152
BBa_P0152 Version 1 (Component)
PoPS -> cI (434) [S0166]

BBa_K173007
BBa_K173007 Version 1 (Component)
aTc inducible system (aTc->PoPS) with J23100 promoter

BBa_K2066506
BBa_K2066506 Version 1 (Component)
RiboJ (Ribozyme Insulator) Lou et. al. 2012

BBa_P0153
BBa_P0153 Version 1 (Component)
PoPS -> cII (p22) [S0167]

BBa_K081016
BBa_K081016 Version 1 (Component)
lasI protein generator - PoPS->lasI

BBa_P0312
BBa_P0312 Version 1 (Component)
PoPS -> LacI [S0156]

BBa_P0340
BBa_P0340 Version 1 (Component)
PoPS -> TetR [S0157]

BBa_I716208
BBa_I716208 Version 1 (Component)
[lox][terminator][lox]

cre
BBa_K112102 Version 1 (Component)
Cre enzyme without start or stop codons

BBa_I732086
BBa_I732086 Version 1 (Component)
[aTc] -> PoPS (version1)

BBa_K274370
BBa_K274370 Version 1 (Component)
PoPS -> P2 ogr - PF promoter -> PoPS

BBa_K427005
BBa_K427005 Version 1 (Component)
MuC sensitivity tuner (PoPS->PoPS)

BBa_K300009
BBa_K300009 Version 1 (Component)
PoPS->3OC6HSL sender device

BBa_K176123
BBa_K176123 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (PoPS->luxR): PoPS->luxR+pLux/Tet->PoPS

BBa_M1617
BBa_M1617 Version 1 (Component)
loXf+tetP+RBS+cre+ssRa+stop+loXr

BBa_K176125
BBa_K176125 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (High LuxR): pCon 0.36->luxR+pLux/Tet->PoPS

BBa_K315007
BBa_K315007 Version 1 (Component)
Lox N forward

BBa_K176129
BBa_K176129 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (Low LuxR): pCon 0.04->luxR+pLux/Tet->PoPS

BBa_K274395
BBa_K274395 Version 1 (Component)
PoPS -> PhiR73 pag - PLL promoter -> PoPS

CHE
BBa_K256023 Version 1 (Component)
Cholesteryl Esterase (CHE)

BBa_K176085
BBa_K176085 Version 1 (Component)
cell density->PoPS: pCon 0.15->luxI-LVA+pCon 0.70->luxR+pLux/Tet->PoPS

BBa_K173010
BBa_K173010 Version 1 (Component)
Lactose/IPTG inducible system (PoPS output)

BBa_K274374
BBa_K274374 Version 1 (Component)
PoPS -> P2 ogr - Psid promoter -> PoPS