iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ATGATG Version 1 (Component) luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_K1344008BBa_K1344008 Version 1 (Component)TolC-HlyB-HlyD Canal for Hemolysin-tag Secretion
BBa_K223030BBa_K223030 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD
BBa_K223031BBa_K223031 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT
BBa_K223034BBa_K223034 Version 1 (Component)trp-operon + RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT (Trp-sensitive HlyA exporter)
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K223029BBa_K223029 Version 1 (Component)HlyR + HlyC + HlyB + HlyD + TT
BBa_M1528BBa_M1528 Version 1 (Component)RBS + HlyB + RBS + HlyD
BBa_K554008BBa_K554008 Version 1 (Component)Hemolysin D - HlyD
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_M1027BBa_M1027 Version 1 (Component)RBS HlyB RBS HlyD RBS TolC Term
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K223025BBa_K223025 Version 1 (Component)HlyR + HlyC + Hly B + Hly D
BBa_K1166002BBa_K1166002 Version 1 (Component)HlyA-tag+Secretion system
FurBO_11498 Version 1 (Component) BBa_K554015BBa_K554015 Version 1 (Component)flhDC HlyB HlyD TolC device
BBa_K554013BBa_K554013 Version 1 (Component)SoxS HlyB HlyD TolC device
BBa_M1004BBa_M1004 Version 1 (Component)HlyD Membrane Protein
BBa_K554007BBa_K554007 Version 1 (Component)Hemolysin B - HlyB
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_M1006BBa_M1006 Version 1 (Component)Promoter, RBS, HlyB, RBS, HlyD, Term
BBa_K2018023BBa_K2018023 Version 1 (Component)hlyA secretion tag
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
BBa_K223057BBa_K223057 Version 1 (Component)Rear Flanking Sequence (HlyB and HlyD)
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
BBa_M1009BBa_M1009 Version 1 (Component)Promoter RBS HlyB RBS HlyD Terminator
BBa_K223056BBa_K223056 Version 1 (Component)Front Flanking Sequence (HlyR, IS1, HlyC)
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_M1003BBa_M1003 Version 1 (Component)HlyB membrane protein
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K390501BBa_K390501 Version 1 (Component)LacPromoter/RBS/PhaP/HlyA/Terminator
BBa_K1810001BBa_K1810001 Version 1 (Component)Repeating QSP Chain with HlyA secretion Tag
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop