iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
vioBvioB Version (Component) BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
BBa_K771202BBa_K771202 Version 1 (Component)VioB with Membrane Anchor 3
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
vioDvioD Version (Component) vioCvioC Version (Component) vioAvioA Version (Component) vioEvioE Version (Component) Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
BBa_K771203BBa_K771203 Version 1 (Component)VioE with Membrane Anchor 4
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K771306BBa_K771306 Version 1 (Component)FabG with Membrane Anchor 3
BBa_K771206BBa_K771206 Version 1 (Component)Vio D with Membrane Anchor 6
BBa_K771205BBa_K771205 Version 1 (Component)Vio C with Membrane Anchor 5
BBa_K771201BBa_K771201 Version 1 (Component)VioA with Membrane Anchor 2(without MS2)
BBa_K771204BBa_K771204 Version 1 (Component)VioC with Membrane Anchor 5(without VVD)
BBa_K771403BBa_K771403 Version 1 (Component)split EGFP2 with Membrane Anchor 3
myristoilaBBa_I712026 Version 1 (Component)myristoilation signal sequence; anchors protein to membrane
BBa_K598020BBa_K598020 Version 1 (Component)B0015+pBAD+vioAB+B0015+pBAD+TPP Up-regulated Hammerhead Ribozyme 1.20+vioD+B0015+pBAD+vioE
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J70638BBa_J70638 Version 1 (Component)rbs VioA rbs VioB
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_J70637BBa_J70637 Version 1 (Component)rbs VioA rbs VioB
BBa_K771307BBa_K771307 Version 1 (Component)FabZ with Membrane Anchor 4
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
PelBBBa_J32015 Version 1 (Component)PelB leader sequence; directs protein to E. coli periplasmic membrane
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
pBAD-CDE-DBBa_K323132 Version 1 (Component)VioC, VioD and VioE enzymes fused with zinc fingers under pBAD promoter
BBa_K771003BBa_K771003 Version 1 (Component)Membrane Anchor 3 :ssDsbA-PDZ Ligand-LGT-SH3 Ligand
BBa_K771308BBa_K771308 Version 1 (Component)FabI with Membrane Anchor 5(without VVD )
BBa_K771404BBa_K771404 Version 1 (Component)split EGFP 1 with Membrane Anchor 4
BBa_K771305BBa_K771305 Version 1 (Component)TesA with Membrane Anchor 2 (without MS2)
BBa_K771401BBa_K771401 Version 1 (Component)Membrane Anchor 0-GFP
BBa_J70641BBa_J70641 Version 1 (Component)rbs vioC rbs vioE
BBa_J70639BBa_J70639 Version 1 (Component)rbs vioC rbs VioD
BBa_K203000BBa_K203000 Version 1 (Component)Plasma membrane targeting (GPI anchor)
OmpABBa_K103006 Version 1 (Component)OmpA outer membrane protein A fused to linker; displays proteins on cell surface
BBa_K771402BBa_K771402 Version 1 (Component)split EGFP 1 with Membrane Anchor 2 (without MS2)
BBa_K771405BBa_K771405 Version 1 (Component)split EGFP 2 with Membrane Anchor 5(without VVD)