iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1115008BBa_K1115008 Version 1 (Component)dhlB + dhlA ligated with HindIII
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_K1115009BBa_K1115009 Version 1 (Component)Constitutive production (PCat) of dhlB and dhlA
BBa_K1115010BBa_K1115010 Version 1 (Component)Constitutive production (PTet) of dhlB and dhlA
BBa_K1115006BBa_K1115006 Version 1 (Component)dhlB + dhlA ligated with HindIII
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
p15ABBa_I50032 Version 1 (Component)p15A replication origin
fhlA-E363BBa_K778002 Version 1 (Component)fhlA-E363G (engineered trascriptional activator fhlA with a mutation)
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1115004BBa_K1115004 Version 1 (Component)dhlA Haloalkane dehalogenase
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K1115007BBa_K1115007 Version 1 (Component)dhlB 2-haloalkanoic acid dehalogenase
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
RFC 37BBa_K245009 Version 1 (Component)RFC 37 Scar Sequence
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
fhlABBa_K778001 Version 1 (Component)fhlA: a transcriptional activator for enhanced hydrogen production
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K1331004BBa_K1331004 Version 1 (Component)Modified rhlB coding sequence from Pseudomonas aeruginosa SQ6
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_K1331001BBa_K1331001 Version 1 (Component)Modified rhlA coding sequence from Pseudomonas aeruginosa SQ6
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
hycApBBa_K778000 Version 1 (Component)hycAp: Promoter of hyc operon activated by FhlA
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
HindIIIBBa_I11076 Version 1 (Component)HindIII restriction enzyme site with extra flanking nucleotides
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
fhlA devicBBa_K778007 Version 1 (Component)FhlA-generator (pLac-RBS-fhlA-d.term)
XhlBBO_11525 Version 1 (Component) BBa_K1092101BBa_K1092101 Version 1 (Component)ssDsbA-PDZ Ligand
xhlBBO_32502 Version 1 (Component)