SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K103007BBa_K103007 Version 1 (Component)linker module ggg_s_ggg
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K1462502BBa_K1462502 Version 1 (Component)PDZ domain + Linker
BBa_K1462503BBa_K1462503 Version 1 (Component)SH3 domain + Linker
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_K323107BBa_K323107 Version 1 (Component)PBSII zinc finger + linker
linkerBBa_K157009 Version 1 (Component)Split fluorophore linker; Freiburg standard
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
BBa_K323105BBa_K323105 Version 1 (Component)Zif268 zinc finger + linker
5xGSBBa_J18922 Version 1 (Component)10aa [GS]x linker
MiddleLinkBBa_K243005 Version 1 (Component)Middle Linker ( Gly-Gly-Ser-Gly)x2
BBa_K1486004BBa_K1486004 Version 1 (Component)flexible linker 2x (GGGGS)
linkerBBa_K365005 Version 1 (Component)20 aa linker RFC-25 (fusion standard Freiburg)
BBa_K103011BBa_K103011 Version 1 (Component)linker module g_s_g
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_J52026BBa_J52026 Version 1 (Component)dnMyD88-linker-GFP
OmpABBa_K103006 Version 1 (Component)OmpA outer membrane protein A fused to linker; displays proteins on cell surface
BBa_K323108BBa_K323108 Version 1 (Component)Jazz zinc finger + linker
BBa_K323109BBa_K323109 Version 1 (Component)Blues zinc finger + linker
BBa_K364167BBa_K364167 Version 1 (Component)Zn Finger Linker segment
BBa_J52012BBa_J52012 Version 1 (Component)Rluc-linker-PEST191
C2HP/RGEBBa_K1442107 Version 1 (Component)C2HP Testing Module (reverse GFP)
ShortLinkeBBa_K243004 Version 1 (Component)Short Linker (Gly-Gly-Ser-Gly)
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
ML-Fok_ABBa_K243008 Version 1 (Component)Middle Linker-Fok_a
BBa_J52021BBa_J52021 Version 1 (Component)dnTraf6-linker-GFP
3xGSBBa_J18921 Version 1 (Component)6aa [GS]x linker
BBa_K1582033BBa_K1582033 Version 1 (Component)Linker+inJanus
BBa_K1321090BBa_K1321090 Version 1 (Component)Phytochelatin (PC) EC20 + Linker-dCBD
TamuraBBa_K1763444 Version 1 (Component)Bombyx mori silk co-spinning module
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)
BBa_K864444BBa_K864444 Version 1 (Component)RFP-Linker-SYFP2
LinkerBBa_K1088051 Version 1 (Component)10 aa linker with BamHI restriction site and TEV recognition site
BBa_J52011BBa_J52011 Version 1 (Component)dnMyD88-linker-Rluc
mCherryBBa_K678020 Version 1 (Component)mCherry-module
BBa_K1582035BBa_K1582035 Version 1 (Component)Linker+inJanus-m
linkerBBa_K157013 Version 1 (Component)15 aa flexible glycine-serine protein domain linker; Freiburg standard
BBa_K633001BBa_K633001 Version 1 (Component)Linker + EstA Membrane Protein
BBa_K243012BBa_K243012 Version 1 (Component)Strep-DigA-Middle Linker-Fok_i
BBa_K243014BBa_K243014 Version 1 (Component)His-FluA-Middle Linker-Fok_i