GAL1GenBank_CP003831_Region_176110_177085 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
BBa_K165079BBa_K165079 Version 1 (Component)pGAL1 + Null synthetic activator on pRS305
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
rhlRBBa_C0071 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)
BBa_I746352BBa_I746352 Version 1 (Component)delta activator from phiR73 phage
GAL-LexABBa_K165068 Version 1 (Component)pGAL1 + LexA activator on pRS305
BBa_K165066BBa_K165066 Version 1 (Component)pGAL1 + Gli1 activator on pRS305
cinrBBa_C0077 Version 1 (Component)cinR activator from Rhizobium leguminosarum (+LVA)
LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
rhIRBBa_C0171 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)
BBa_K165080BBa_K165080 Version 1 (Component)pGAL1 + Untagged LexA activator on pRS305
BBa_K165081BBa_K165081 Version 1 (Component)pGAL1 + Untagged Zif268-HIV activator on pRS305
BBa_K165029BBa_K165029 Version 1 (Component)Null synethtic activator
BBa_I746350BBa_I746350 Version 1 (Component)ogr activator from P2 phage
lexABBa_K165020 Version 1 (Component)LexA Synthetic Activator (untagged)
BBa_K165069BBa_K165069 Version 1 (Component)pMET25 + null repressor on pRS304*
BBa_K165082BBa_K165082 Version 1 (Component)pMET25 + Untagged LexA activator on pRS305
BBa_K165086BBa_K165086 Version 1 (Component)pTEF2 + Untagged LexA activator on pRS305
BBa_K165084BBa_K165084 Version 1 (Component)pADH1 + Untagged LexA activator on pRS305
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K165083BBa_K165083 Version 1 (Component)pMET25 + Untagged Zif268-HIV activator on pRS305
BBa_K165085BBa_K165085 Version 1 (Component)pADH1 + Untagged Zif268-HIV activator on pRS305
BBa_K165087BBa_K165087 Version 1 (Component)pTEF2 + Untagged Zif268-HIV activator on pRS305
BBa_K165022BBa_K165022 Version 1 (Component)Zif268-HIV synthetic activator (untagged)
BBa_I746351BBa_I746351 Version 1 (Component)pag activator from PSP3 phage
BBa_K553003BBa_K553003 Version 1 (Component)constitutive production of LasR trans-activator