Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
amilCPBBa_K592009 Version 1 (Component)amilCP, blue chromoprotein
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1484001BBa_K1484001 Version 1 (Component)tsPurple chromoprotein in GoldenGate standard
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
tsPurpleBBa_K1033906 Version 1 (Component)tsPurple, purple chromoprotein
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
gfasPurpleBBa_K1033919 Version 1 (Component)gfasPurple, purple chromoprotein
cjBlueBBa_K592011 Version 1 (Component)cjBlue, green chromoprotein
BBa_K1484000BBa_K1484000 Version 1 (Component)AsPink chromoprotein in GoldenGate standard
tsPurpleBBa_K1033905 Version 1 (Component)tsPurple, purple chromoprotein (incl RBS)
BBa_K1467201BBa_K1467201 Version 1 (Component)GoldenGate compatible AmilCP, Blue chromoprotein
eforRedBBa_K592012 Version 1 (Component)eforRed, red chromoprotein
amilGFPBBa_K592010 Version 1 (Component)amilGFP, yellow chromoprotein
BBa_K1033903BBa_K1033903 Version 1 (Component)tsPurple, purple chromoprotein (incl RBS, J23110)
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
aeBlueBBa_K864401 Version 1 (Component)aeBlue blue chromoprotein
BBa_K1467101BBa_K1467101 Version 1 (Component)GoldenGate compatible 35s Promoter
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_K1033904BBa_K1033904 Version 1 (Component)tsPurple, purple chromoprotein (incl RBS, J23106)
BBa_K1051002BBa_K1051002 Version 1 (Component)Stop codon free EYFP in RFC[23] standard
BBa_K1033930BBa_K1033930 Version 1 (Component)amilCP, blue/purple chromoprotein (incl RBS)
BBa_K1051001BBa_K1051001 Version 1 (Component)Stop codon free ECFP in RFC[23] standard
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
BBa_K1033932BBa_K1033932 Version 1 (Component)spisPink, pink chromoprotein
BBa_K1467204BBa_K1467204 Version 1 (Component)GoldenGate compatible Green Flourescent Protein (GFP)
fwYellowBBa_K1033910 Version 1 (Component)fwYellow, yellow chromoprotein
BBa_K1467202BBa_K1467202 Version 1 (Component)GoldenGate compatible AmilGFP, Yellow Chromoprotein
BBa_K929302BBa_K929302 Version 1 (Component)AID in Potsdam Standard
BBa_K1033916BBa_K1033916 Version 1 (Component)amajLime, yellow-green chromoprotein
BBa_K1996004BBa_K1996004 Version 1 (Component)Purple chromoprotein
BBa_K1484002BBa_K1484002 Version 1 (Component)AmajLime chromoprotein in BBa and MoClo standard
BBa_K1033929BBa_K1033929 Version 1 (Component)aeBlue, blue chromoprotein (incl RBS)
BBa_K1484006BBa_K1484006 Version 1 (Component)EforRed chromoprotein in BBa and MoClo standard
BBa_K1484004BBa_K1484004 Version 1 (Component)AmilGFP chromoprotein in BBa and MoClo standard
BBa_K1484007BBa_K1484007 Version 1 (Component)cjBlue chromoprotein in BBa and MoClo standard
BBa_K1484008BBa_K1484008 Version 1 (Component)AeBlue0034 chromoprotein in BBa and MoClo standard
BBa_K1484003BBa_K1484003 Version 1 (Component)AeBlue chromoprotein in BBa and MoClo standard
BBa_K1033933BBa_K1033933 Version 1 (Component)asPink, pink chromoprotein
BBa_K1357008BBa_K1357008 Version 1 (Component)tsPurple Reporter (RBS + Coding + Terminator)
BBa_K404319BBa_K404319 Version 1 (Component)Cyan fluorescent protein (CFP) in RFC25 standard
BBa_K1033917BBa_K1033917 Version 1 (Component)gfasPurple, purple chromoprotein (incl RBS, J23110)
BBa_K1467104BBa_K1467104 Version 1 (Component)GoldenGate compatible MAS promoter
BBa_K1824890BBa_K1824890 Version 1 (Component)The Sequence of the SpeI/XbaI scar in BioBricks standard assembly.
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25