BBa_K1660005BBa_K1660005 Version 1 (Component)RFP controlled by the PompR promoter
YFP_SPtom4BBa_K809316 Version 1 (Component)YFP + signal peptide of Tom40
BBa_J23080BBa_J23080 Version 1 (Component)b0034 derived RBS to match spacing of J01122
Intein_assisted_Bisection_MappingIntein_assisted_Bisection_Mapping_collection Version 1 (Collection)Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because the already intricate split site identification problem is often complicated by the requirement of extein junction sequences. To address this, we augmented a mini-Mu transposon-based screening approach and devised the intein-assisted bisection mapping (IBM) method. IBM robustly revealed clusters of split sites on five proteins, converting them into AND or NAND logic gates. We further showed that the use of inteins expands functional sequence space for splitting a protein. We also demonstrated the utility of our approach over rational inference of split sites from secondary structure alignment of homologous proteins. Furthermore, the intein inserted at an identified site could be engineered by the transposon again to become partially chemically inducible, and to some extent enabled post-translational tuning on host protein function. Our work offers a generalizable and systematic route towards creating split protein-intein fusions and conditional inteins for protein activity control.
BBa_K1431301BBa_K1431301 Version 1 (Component)TRE-3G promoter+SV40 PolyA, an ideal controller of mammalian gene expression with Tet-On 3G protein
BBa_K1075041BBa_K1075041 Version 1 (Component)RBS32-MazE-(Ec)ssrA(DAS+4)
BBa_K1001758BBa_K1001758 Version 1 (Component)AraC coding upstream of Lux promoter upstream of GFP
BBa_K2044001BBa_K2044001 Version 1 (Component)Based on our project, <2-4-8> is a feasible pathway from Site No. 2 to Site No. 8
BBa_K814008BBa_K814008 Version 1 (Component)ScyB (leucine dehydrogenase) generator
DR-BphBBa_K646002 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome
BBa_I759038BBa_I759038 Version 1 (Component)Ptet_cis4_YFP
BBa_S05273BBa_S05273 Version 1 (Component)Leucine Zipper with flexible linker
BBa_I11013BBa_I11013 Version 1 (Component)Modification of biobricks part BBa_B0015
SEGA023SEGA023 Version 1 (Component)natural linear DNA.
SEGA012SEGA012 Version 1 (Component)natural linear DNA.
SEGA025SEGA025 Version 1 (Component)natural linear DNA.
SEGA020SEGA020 Version 1 (Component)natural linear DNA.
SEGA080SEGA080 Version 1 (Component)natural linear DNA.
SEGA082SEGA082 Version 1 (Component)natural linear DNA.
SEGA059SEGA059 Version 1 (Component)natural linear DNA.
SEGA092SEGA092 Version 1 (Component)natural linear DNA.
SEGA065SEGA065 Version 1 (Component)natural linear DNA.
SEGA095SEGA095 Version 1 (Component)natural linear DNA.
SEGA064SEGA064 Version 1 (Component)natural linear DNA.
SEGA075SEGA075 Version 1 (Component)natural linear DNA.
Strong+ImmBBa_K320006 Version 1 (Component)Constitutive expression of Immunotoxin
BBa_K1375011BBa_K1375011 Version 1 (Component)Plac+RBS+LuxI+DT
BBa_K1058003BBa_K1058003 Version 1 (Component)Promoter of penicillinase blaZ as well as promoter of blaR1
BBa_S05157BBa_S05157 Version 1 (Component)GFP+I702
BBa_K1583013BBa_K1583013 Version 1 (Component)CsgA missing the start codon for fusion protein
BBa_S04437BBa_S04437 Version 1 (Component)R0040:J61046
BBa_K189061BBa_K189061 Version 1 (Component)Gp16 of Bacteriophage Mu
BBa_K835002BBa_K835002 Version 1 (Component)cytoplasmic region of tar
BBa_K189065BBa_K189065 Version 1 (Component)E18 of Bacteriophage Mu
BBa_K189068BBa_K189068 Version 1 (Component)C of Bacteriophage Mu
BBa_J100020BBa_J100020 Version 1 (Component)Second Half of AspC
BBa_K189052BBa_K189052 Version 1 (Component)GP7 of Bacteriophage Mu
BBa_K189050BBa_K189050 Version 1 (Component)Kil of Bacteriophage Mu
BBa_M30050BBa_M30050 Version 1 (Component)Refactoring of M13K07 genome
BBa_K189075BBa_K189075 Version 1 (Component)Gp28 of Bacteriophage Mu
BBa_K189056BBa_K189056 Version 1 (Component)Gp11 of Bacteriophage Mu
BBa_K189062BBa_K189062 Version 1 (Component)Gp16 of Bacteriophage Mu
BBa_K189057BBa_K189057 Version 1 (Component)Gp12 of Bacteriophage Mu
BBa_J61052BBa_J61052 Version 1 (Component)[neuS1] of K1 ORF
BBa_K189051BBa_K189051 Version 1 (Component)Gp6 of Bacteriophage Mu
BBa_K189070BBa_K189070 Version 1 (Component)Gp23 of Bacteriophage Mu
BBa_K189066BBa_K189066 Version 1 (Component)E19 of Bacteriophage Mu
BBa_I714002BBa_I714002 Version 1 (Component)traI of F plasmid