Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
tetRBBa_Q04400 Version 1 (Component)QPI (B0034.C0040.B0015.R0040)
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
AraCBBa_R0080 Version 1 (Component)Promoter (AraC regulated)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_I7101BBa_I7101 Version 1 (Component)R0040.B0032.E0040.B0015
cI HK022BBa_R0050 Version 1 (Component)Promoter (HK022 cI regulated)
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_J85202BBa_J85202 Version 1 (Component)R0040.B0034.E0040
BBa_S03518BBa_S03518 Version 1 (Component)B0034:C0040
BBa_P111110BBa_P111110 Version 1 (Component)LIS Expression Cassette (R0040)
BBa_E5503BBa_E5503 Version 1 (Component)R0040.B0030.E0040
BBa_E5504BBa_E5504 Version 1 (Component)R0040.B0032.E0040
BBa_P111109BBa_P111109 Version 1 (Component)LMS Expression Cassette (R0040)
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K1795002BBa_K1795002 Version 1 (Component)R0010 gRNA under R0040
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1403013BBa_K1403013 Version 1 (Component)Geosmin expression cassette
BBa_P111107BBa_P111107 Version 1 (Component)EHT1 Expression Cassette (R0040)
BBa_P111111BBa_P111111 Version 1 (Component)Oe23 Expression Cassette (R0040)
BBa_P111105BBa_P111105 Version 1 (Component)SAAT Expression Cassette (R0040)
BBa_P111113BBa_P111113 Version 1 (Component)PAD1 Expression Cassette (R0040)
BBa_P111102BBa_P111102 Version 1 (Component)BAMT Expression Cassette (R0040)
BBa_P111106BBa_P111106 Version 1 (Component)BEAT Expression Cassette (R0040)
BBa_P111108BBa_P111108 Version 1 (Component)EEB1 Expression Cassette (R0040)
BBa_E5500BBa_E5500 Version 1 (Component)B0030.E0040
BBa_K314101BBa_K314101 Version 1 (Component)Low constitutive expression cassette
BBa_P111112BBa_P111112 Version 1 (Component)Myrcene Synthase Expression Cassette (R0040)