BBa_K176093BBa_K176093 Version 1 (Component)Cell density controller: pCon 1.00->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176094BBa_K176094 Version 1 (Component)Cell density controller: pCon 0.70->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176092BBa_K176092 Version 1 (Component)Cell density controller: pCon max->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K142046BBa_K142046 Version 1 (Component)tet-controlled LacI generator
BBa_J04795BBa_J04795 Version 1 (Component)Riboswitch designed to turn "ON" a protein
BBa_K176199BBa_K176199 Version 1 (Component)Cell density controller: pCon 0.70->luxI-LVA+pCon 0.70->luxR+pLux/Tet->ccdB-LVA(weak RBS)
BBa_K176215BBa_K176215 Version 1 (Component)Cell density controller: pCon 0.01->luxI-LVA+pCon 0.70->luxR+pLux/Tet->ccdB-LVA(weak RBS)
BBa_K176196BBa_K176196 Version 1 (Component)Cell density controller: pCon 0.70->luxI-LVA+pCon 0.36->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176211BBa_K176211 Version 1 (Component)Cell density controller: pCon 0.04->luxI-LVA+pCon 0.70->luxR+pLux/Tet->ccdB-LVA(weak RBS)
BBa_K176207BBa_K176207 Version 1 (Component)Cell density controller: pCon 0.15->luxI-LVA+pCon 0.70->luxR+pLux/Tet->ccdB-LVA(weak RBS)
BBa_K176153BBa_K176153 Version 1 (Component)Cell density controller: pCon 0.04->luxI-LVA+pCon 0.36->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176203BBa_K176203 Version 1 (Component)Cell density controller: pCon 0.36->luxI-LVA+pCon 0.70->luxR+pLux/Tet->ccdB-LVA(weak RBS)
BBa_K176150BBa_K176150 Version 1 (Component)Cell density controller: pCon 0.15->luxI-LVA+pCon 0.36->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176147BBa_K176147 Version 1 (Component)Cell density controller: pCon 0.36->luxI-LVA+pCon 0.36->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176156BBa_K176156 Version 1 (Component)Cell density controller: pCon 0.01->luxI-LVA+pCon 0.36->luxR+pLux/Tet->lacZalpha-ccdB(weak RBS)
BBa_K176204BBa_K176204 Version 1 (Component)Cell density controller: pCon 0.36->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA(weak RBS)
BBa_K176200BBa_K176200 Version 1 (Component)Cell density controller: pCon 0.70->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA(weak RBS)
BBa_K176208BBa_K176208 Version 1 (Component)Cell density controller: pCon 0.15->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA(weak RBS)
BBa_K176212BBa_K176212 Version 1 (Component)Cell density controller: pCon 0.04->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA(weak RBS)
BBa_K176216BBa_K176216 Version 1 (Component)Cell density controller: pCon 0.01->luxI-LVA+pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA(weak RBS)
BBa_I763003BBa_I763003 Version 1 (Component)GFP coding device switched on by IPTG
placIQ RBSBBa_K193604 Version 1 (Component)GFP behind a constitutive promoter (placIQ) on pSB4A5
BBa_K1713016BBa_K1713016 Version 1 (Component)pTetR+B0034+LuxR(+MCS)+B0015
BBa_K249000BBa_K249000 Version 1 (Component)Tet Repressible YFP
BBa_J37021BBa_J37021 Version 1 (Component)pTetR Transfer Function with aTc
StalkerBBa_J06001 Version 1 (Component)Tet repressible luxI generator ( LVA+ )
BBa_I13110BBa_I13110 Version 1 (Component)Tet Self-coupled Inverter
placIQ RBSBBa_K193601 Version 1 (Component)Constitutive Promoter (placIQ ) + RBS + melA on Low copy vector(pSB6A1)
BBa_I759033BBa_I759033 Version 1 (Component)cis1-repressed, tet-regulated YFP
BBa_I759045BBa_I759045 Version 1 (Component)cis7-repressed, tet-regulated YFP
BBa_I759043BBa_I759043 Version 1 (Component)cis6-repressed, tet-regulated YFP
BBa_I759037BBa_I759037 Version 1 (Component)cis3-repressed, tet-regulated YFP
BBa_I759047BBa_I759047 Version 1 (Component)cis8-repressed, tet-regulated YFP
BBa_I759041BBa_I759041 Version 1 (Component)cis5-repressed, tet-regulated YFP
BBa_I759035BBa_I759035 Version 1 (Component)cis2-repressed, tet-regulated YFP
BBa_K165100BBa_K165100 Version 1 (Component)Gli1 bs + LexA bs + mCYC + LexA repressor (mCherryx2 tagged) on pRS304*
BBa_K1444011BBa_K1444011 Version 1 (Component)Composite promoter and consensus B. subtilis RBS - pTetR
BBa_S03736BBa_S03736 Version 1 (Component)pLac-lox-RBS-Tet (in pSB1A2)
BBa_K208013BBa_K208013 Version 1 (Component)Tet Repressible Promoter (BBa_R0040) and RBS (BBa_B0034)
BBa_K1444014BBa_K1444014 Version 1 (Component)Composite promoter and weak B. subtilis RBS - pTetR x2
BBa_S03766BBa_S03766 Version 1 (Component)RBS-Kan-RBS-Tet-RBS-RFP (pSB1A7)
BBa_K165101BBa_K165101 Version 1 (Component)Zif268-HIV bs + LexA bs + mCYC + Zif268-HIV repressor (mCherryx2 tagged) on pRS304*
BBa_K092500BBa_K092500 Version 1 (Component)TetR cds with RBS and Terminator + pTetR, RFP with RBS
BBa_S03737BBa_S03737 Version 1 (Component)pLac-lox-RFP(reverse)-TT-lox-RBS-Tet (psB1A2)
BBa_K415011BBa_K415011 Version 1 (Component)PtetR : RBS : LuxR : Term : PluxR/cI-OR : RBS : mCherry : Term : Plux/cI-OR : RBS : LuxI
BBa_K1520509BBa_K1520509 Version 1 (Component)PgolTS-golS-PgolB-rbs-tetR-Ter-PtetO-rbs-rfp-Ter-Plac-rbs-tetR-Ter-Pcons2-rbs-lacI-Ter
SEGASEGA_collection Version 1 (Collection)In the Standardized Genome Architecture (SEGA), genomic integration of DNA fragments is enabled by λ-Red recombineering and so-called landing pads that are a common concept in synthetic biology and typically contain features that i) enable insertion of additional genetic elements and ii) provide well-characterized functional parts such as promoters and genes, and iii) provides insulation against genome context-dependent effects. The SEGA landing pads allow for reusable homology regions and time-efficient construction of parallel genetic designs with a minimal number of reagents and handling steps. SEGA bricks, typically synthetic DNA or PCR fragments, are integrated on the genome simply by combining the two reagents (i.e. competent cells and DNA), followed by incubation steps, and successful recombinants are identified by visual inspection on agar plates. The design of the SEGA standard was heavily influenced by the Standard European Vector Architecture (SEVA). SEGA landing pads typically hosts two major genetic “control elements” that influence gene expression on the transcriptional (C1), and translational (C2) level. Furthermore, landing pads contain gadgets such as selection and counterselection markers.
Intein_assisted_Bisection_MappingIntein_assisted_Bisection_Mapping_collection Version 1 (Collection)Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because the already intricate split site identification problem is often complicated by the requirement of extein junction sequences. To address this, we augmented a mini-Mu transposon-based screening approach and devised the intein-assisted bisection mapping (IBM) method. IBM robustly revealed clusters of split sites on five proteins, converting them into AND or NAND logic gates. We further showed that the use of inteins expands functional sequence space for splitting a protein. We also demonstrated the utility of our approach over rational inference of split sites from secondary structure alignment of homologous proteins. Furthermore, the intein inserted at an identified site could be engineered by the transposon again to become partially chemically inducible, and to some extent enabled post-translational tuning on host protein function. Our work offers a generalizable and systematic route towards creating split protein-intein fusions and conditional inteins for protein activity control.