SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
4-fingersBBa_J35004 Version 1 (Component)4-fingers arm
6-fingersBBa_J35006 Version 1 (Component)6-fingers arm
5-fingersBBa_J35005 Version 1 (Component)5-fingers arm
3-fingersBBa_J35003 Version 1 (Component)3-fingers arm
7-fingersBBa_J35007 Version 1 (Component)7-fingers arm
BBa_K1497010BBa_K1497010 Version 1 (Component)Dihydroflavonol 4-reductase (DFR)
BBa_K323107BBa_K323107 Version 1 (Component)PBSII zinc finger + linker
BBa_J202003BBa_J202003 Version 1 (Component)PBAD Mutant#4
LacBBa_K500003 Version 1 (Component)lignin degradation 4
BBa_K801093BBa_K801093 Version 1 (Component)4-coumarate--coenzyme A ligase (4CL) coding region
BBa_I13515BBa_I13515 Version 1 (Component)Screening Plasmid 4
BBa_K323105BBa_K323105 Version 1 (Component)Zif268 zinc finger + linker
ssrA(DAS+4BBa_K1075020 Version 1 (Component)E. coli ssrA(DAS+4)
BBa_K1150042BBa_K1150042 Version 1 (Component)uniCAS RNaimer to Bla Target 4
BBa_J07012BBa_J07012 Version 1 (Component)scFv anti-fluorescein [4-4-20]
BBa_K2066020BBa_K2066020 Version 1 (Component)UNS 4 Sequence, from Torella et al., 2013
pRMBBa_K566001 Version 1 (Component)pRM promoter from Lambda
BBa_K1351031BBa_K1351031 Version 1 (Component)LMU Bacillus RBS collection 4
BBa_C2005BBa_C2005 Version 1 (Component)Homodimeric zinc finger
BBa_J33201BBa_J33201 Version 1 (Component)E. coli chromosomal ars promoter with arsR repressor gene
BBa_K1150067BBa_K1150067 Version 1 (Component)Cas9 trunc. #4
BBa_K264003BBa_K264003 Version 1 (Component)Modular UP-element Design 4
BBa_J24683BBa_J24683 Version 1 (Component)4. W RBS - LacI
BBa_K323108BBa_K323108 Version 1 (Component)Jazz zinc finger + linker
P11-4BBa_K2015001 Version 1 (Component)P11-4
BBa_C2002BBa_C2002 Version 1 (Component)Homodimeric zinc finger
BBa_K874001BBa_K874001 Version 1 (Component)Polydactyl Zinc Finger (PZF3838)
BBa_K416004BBa_K416004 Version 1 (Component)Aga2:(Gly3Ser)4 Linker Composite Part
BBa_K323109BBa_K323109 Version 1 (Component)Blues zinc finger + linker
BBa_K364167BBa_K364167 Version 1 (Component)Zn Finger Linker segment
BBa_K801092BBa_K801092 Version 1 (Component)4-coumarate - coenzym A ligase (4CL) + yeast consensus sequence
scFvBBa_K1933002 Version 1 (Component)anti-Norovirus GII.4 scFv
BBa_K364143BBa_K364143 Version 1 (Component)Zinc Finger Protein CCC
BBa_K364153BBa_K364153 Version 1 (Component)Zinc Finger Protein TGA
Prm+BBa_I12034 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI with cooperativity) RBS+
araMBO_31508 Version 1 (Component) ArfMBO_10853 Version 1 (Component) Prm +BBa_I12010 Version 1 (Component)Modified lamdba Prm promoter (repressed by p22 cII)