SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
Lin-2BO_9115 Version 1 (Component) "Eye 2"BBa_K1080011 Version 1 (Component)ChlI2
2/3GlyBBa_K1362467 Version 1 (Component)other 2/3Gly
BBa_K500001BBa_K500001 Version 1 (Component)lignin degradation 2
Lock 2BBa_J01011 Version 1 (Component)Riboregulator Lock 2
Key 2BBa_J01009 Version 1 (Component)Riboregulator Key 2
BBa_K1399007BBa_K1399007 Version 1 (Component)GFP (mut3b) with SsrA-DAS+2 degradation tag
BBa_K203111BBa_K203111 Version 1 (Component)Constitutive promoter; 2 REU
BBa_K1763440BBa_K1763440 Version 1 (Component)MaSp1/2[1:1]-12(1C3)
BBa_I13513BBa_I13513 Version 1 (Component)Screening Plasmid 2
BBa_K1150040BBa_K1150040 Version 1 (Component)uniCAS RNAimer to Bla Target 2
EFEBBa_K1065000 Version 1 (Component)<html>2-oxoglutarate oxygenase/decarboxylase (EFE)</html>
2/3GlyBBa_K1362464 Version 1 (Component)2/3Gly
BBa_K1351029BBa_K1351029 Version 1 (Component)LMU Bacillus RBS collection 2
BBa_K1499202BBa_K1499202 Version 1 (Component)Deinococcus radiodurans uracil-DNA glycosylase 2
BBa_K1151010BBa_K1151010 Version 1 (Component)GFP nickel regulated 2
BBa_K264001BBa_K264001 Version 1 (Component)Modular UP-element Design 2
BBa_K1763441BBa_K1763441 Version 1 (Component)MaSp1/2[1:1]-12(T7)
BBa_K2066504BBa_K2066504 Version 1 (Component)ICA:BsmBI Cut Site + G + Sticky End 2
BBa_K1430000BBa_K1430000 Version 1 (Component)yeast 2-micron
BBa_K1150065BBa_K1150065 Version 1 (Component)Cas9 trunc. #2
BBa_K1994007BBa_K1994007 Version 1 (Component)synRBS 9675 TIRv(1 or 2)
BBa_K1212005BBa_K1212005 Version 1 (Component)TALe Binding Site 2 (specific to TAL repressor 2)
BBa_K1935005BBa_K1935005 Version 1 (Component)White collar-2 (WC-2) - photoreceptor in Neurospora tetrasperma