iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_J70120BBa_J70120 Version 1 (Component)Library Insert Test Plasmid for J70050 and J70052
BBa_J70052BBa_J70052 Version 1 (Component)Right Library Insert Preparation Part (To use with J70050, and J70040)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_J70556BBa_J70556 Version 1 (Component)BsaXI test circuit: J70555.J70554 or J70554.J70550.J70554
BBa_J70050BBa_J70050 Version 1 (Component)Left Library Insert Preparation Part (To use with J70052, and J70040)
FurBO_11498 Version 1 (Component) //testtest Version 1 (Collection) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_S04176BBa_S04176 Version 1 (Component)J70010:J70044
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
BBa_J70555BBa_J70555 Version 1 (Component)J70553.J70550 composite part
BBa_J70100BBa_J70100 Version 1 (Component)Library Vector Test Plasmid for J70040
//test1test1 Version 1 (Collection) BBa_J70110BBa_J70110 Version 1 (Component)Library Vector Test Plasmid for J70034
BBa_S04177BBa_S04177 Version 1 (Component)J70052:J70052
BBa_J70559BBa_J70559 Version 1 (Component)N-terminal fusion test: R0010:J70558 or R0010:J70550:E0040
BBa_J70566BBa_J70566 Version 1 (Component)Test part for J70550
BBa_J70552BBa_J70552 Version 1 (Component)J70551.J70549 (or J70548.J70550.J70549) composite part
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_J70089BBa_J70089 Version 1 (Component)Test for part J70084
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_J07052BBa_J07052 Version 1 (Component)FecA::scFv internal fusion type 1 @ aa527
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
BBa_J70012BBa_J70012 Version 1 (Component)A BioScaffold Part (Uses PsrI), Protein Head Remover see Part Design page
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
PESTBBa_J176018 Version 1 (Component)PEST
BBa_J07005BBa_J07005 Version 1 (Component)PhoA (E.coli JM83 alkaline phosphatase gene)
BBa_J10050BBa_J10050 Version 1 (Component)weak promoter + weak RBS + lacZa.GFP fusion
BBa_J10052BBa_J10052 Version 1 (Component)weak promoter + med RBS + lacZa.GFP fusion
BBa_J70402BBa_J70402 Version 1 (Component)pBG7AU (J70310) plus TetM (J70028)
BBa_J70605BBa_J70605 Version 1 (Component)J70590 cut with BsaXI and with GSGSGS inserts (J70556-fi,ri) added
BBa_J07059BBa_J07059 Version 1 (Component)FecA::scFv internal fusion type 2 @ aa526-532
BBa_J07051BBa_J07051 Version 1 (Component)FecA::scFv internal fusion type 1 @ aa180
BBa_J70562BBa_J70562 Version 1 (Component)C-Terminal fusion test: J70561:J70550