SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_K1111006
BBa_K1111006 Version 1 (Component)
Matrix metalloprotease 2 (MMP2)

BBa_I728951
BBa_I728951 Version 1 (Component)
Human Matrix Metalloproteinase 1 (Mmp1)

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_I711007
BBa_I711007 Version 1 (Component)
Matrix Metalloproteinase-9 Generator

BBa_K1018000
BBa_K1018000 Version 1 (Component)
Matrix Metallopeptidase 9 (MMP-9)

BBa_K733006
BBa_K733006 Version 1 (Component)
<i>ydjM</i>+<i>Bmp2</i>

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K1833010
BBa_K1833010 Version 1 (Component)
pT7-MMP2 sensitive repressor

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

MaTif
BBa_K2127007 Version 1 (Component)
MT - TERMINATOR

BBa_K733014
BBa_K733014 Version 1 (Component)
<i>Pveg</i>+RBS+<i>ydjM</i>+<i>Bmp2</i>

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

BMP2
BBa_K415500 Version 1 (Component)
BMP2 L1L2 MammoBlock Entry Vector

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)

BBa_K1486007
BBa_K1486007 Version 1 (Component)
IFP[2]

"Eye 2"
BBa_K1080011 Version 1 (Component)
ChlI2

BBa_K1799000
BBa_K1799000 Version 1 (Component)
pLsrA-2

2/3Gly
BBa_K1362467 Version 1 (Component)
other 2/3Gly

BBa_K1051109
BBa_K1051109 Version 1 (Component)
targeting peptide to mitochondria matrix;MIA40

BBa_K500001
BBa_K500001 Version 1 (Component)
lignin degradation 2

BBa_K733016
BBa_K733016 Version 1 (Component)
<i>Pveg</i>+RBS+<i>ydjM</i>+<i>Bmp2</i>+terminator

BBa_K733017
BBa_K733017 Version 1 (Component)
<i>Pveg</i>+RBS+<i>ybdN</i>+<i>Bmp2</i>+terminator

Lock 2
BBa_J01011 Version 1 (Component)
Riboregulator Lock 2

Key 2
BBa_J01009 Version 1 (Component)
Riboregulator Key 2

BBa_K1399007
BBa_K1399007 Version 1 (Component)
GFP (mut3b) with SsrA-DAS+2 degradation tag

BBa_K733005
BBa_K733005 Version 1 (Component)
<i>ybdN</i>+<i>Bmp2</i>

BBa_K203111
BBa_K203111 Version 1 (Component)
Constitutive promoter; 2 REU

BBa_K1763440
BBa_K1763440 Version 1 (Component)
MaSp1/2[1:1]-12(1C3)

BBa_I13513
BBa_I13513 Version 1 (Component)
Screening Plasmid 2

BBa_K1833008
BBa_K1833008 Version 1 (Component)
pT7-MMP9 sensitive repressor

BBa_K1150040
BBa_K1150040 Version 1 (Component)
uniCAS RNAimer to Bla Target 2

EFE
BBa_K1065000 Version 1 (Component)
<html>2-oxoglutarate oxygenase/decarboxylase (EFE)</html>

2/3Gly
BBa_K1362464 Version 1 (Component)
2/3Gly

BBa_M39901
BBa_M39901 Version 1 (Component)
blah 2

BBa_K1351029
BBa_K1351029 Version 1 (Component)
LMU Bacillus RBS collection 2

BBa_K1499202
BBa_K1499202 Version 1 (Component)
Deinococcus radiodurans uracil-DNA glycosylase 2

BBa_K1111007
BBa_K1111007 Version 1 (Component)
MMP2 under the control of the pBAD/araC arabinose inducible promoter

BBa_K1486017
BBa_K1486017 Version 1 (Component)
fLuc[2]

BBa_K1151010
BBa_K1151010 Version 1 (Component)
GFP nickel regulated 2