Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
PenIBBa_R0074 Version 1 (Component)Promoter (PenI regulated)
penIBBa_C0074 Version 1 (Component)penI repressor from Bacillus licheniformis (+LVA)
BBa_Q04740BBa_Q04740 Version 1 (Component)Pen1 quad part inverter
BBa_Q03740BBa_Q03740 Version 1 (Component)PenI quad part inverter
BBa_Q02740BBa_Q02740 Version 1 (Component)PenI quad part inverter
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_Q0001BBa_Q0001 Version 1 (Component)Quad Part
BBa_K249001BBa_K249001 Version 1 (Component)Arabinose Induced Inverter
BBa_I14103BBa_I14103 Version 1 (Component)penI inverter + tetR inverter
BBa_K566006BBa_K566006 Version 1 (Component)penI-pCpcG2-pPenI-mnt
BBa_I13027BBa_I13027 Version 1 (Component)penI QPI intermediate
BBa_J61016BBa_J61016 Version 1 (Component)Biobrick converter for BamHI-part-EcoRI
BBa_I14104BBa_I14104 Version 1 (Component)tetR + penI inverters in series
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K173005BBa_K173005 Version 1 (Component)tetR logic inverter
PenI invBBa_K566010 Version 1 (Component)PenI repressor optimized for E. coli (inverted sequence)
tetR inverBBa_Q04401 Version 1 (Component)TetR-derived transcriptional inverter
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
tuaDBO_32544 Version 1 (Component) BBa_P20060BBa_P20060 Version 1 (Component)3OC6HSL->Inverter->PoPS
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
penPBO_32748 Version 1 (Component) PenPBO_26412 Version 1 (Component) BBa_K173008BBa_K173008 Version 1 (Component)tetR inverter - GFP
BBa_I14101BBa_I14101 Version 1 (Component)RBS + penI
BBa_I14100BBa_I14100 Version 1 (Component)RBS + penI
BBa_I14048BBa_I14048 Version 1 (Component)PenI toggle
YuaDBO_10435 Version 1 (Component) yuaDBO_30391 Version 1 (Component) GuaDBO_26215 Version 1 (Component) guaDBO_28943 Version 1 (Component) guaDBO_2795 Version 1 (Component) BBa_I750006BBa_I750006 Version 1 (Component)OmpR inverter
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
tenIBO_31265 Version 1 (Component) TenIBO_9211 Version 1 (Component) BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA