Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_M1260
BBa_M1260 Version 1 (Component)
genome is Aquifax aeolicus VF5

BBa_M1261
BBa_M1261 Version 1 (Component)
Aquifex aeolicus VF5 composite

amyE 5 IS
BBa_K143001 Version 1 (Component)
5??? Integration Sequence for the amyE locus of B. subtilis

VF2
BBa_G00100 Version 1 (Component)
Forward primer for sequencing/amplifying BioBrick parts (VF2)

BBa_K748003
BBa_K748003 Version 1 (Component)
yddV is a Diguanylate Cyclase-Genomic.

BBa_M1262
BBa_M1262 Version 1 (Component)
Aquifex Composite

BBa_M1263
BBa_M1263 Version 1 (Component)
Aquifex Composite

amyE 3 IS
BBa_K143002 Version 1 (Component)
3??? Integration Sequence for the amyE locus of B. subtilis

BBa_K737033
BBa_K737033 Version 1 (Component)
galK is the leader sequence of galactokinase (GalK)

BBa_K779307
BBa_K779307 Version 1 (Component)
TagBFP-FF5 MammoBlock

BBa_K1114300
BBa_K1114300 Version 1 (Component)
This is the MoClo formatted part of BBa_B0015.

VR5
BBa_K176049 Version 1 (Component)
Reverse primer VR5 (bind to K176039), member of VR3~VR12

BBa_J85800
BBa_J85800 Version 1 (Component)
LacI-T2A-EBFP2-FF5-miRFF4

ZF5
BBa_K655004 Version 1 (Component)
Zinc Finger Protein (ZF5) (binding site: GTGGAGGCT)

VR5 bindin
BBa_K176039 Version 1 (Component)
Reverse primer VR5 (K176049) binding site

pyrD 3 IS
BBa_K143009 Version 1 (Component)
3??? Integration Sequence for the pyrD locus of B. subtilis

pyrD 5 IS
BBa_K143008 Version 1 (Component)
5??? Integration Sequence for the pyrD locus of B. subtilis

epsE 5 IS
BBa_K143005 Version 1 (Component)
5??? Integration Sequence for the epsE locus of B. subtilis

epsE 3 IS
BBa_K143006 Version 1 (Component)
3??? Integration Sequence for the epsE locus of B. subtilis

BBa_K1055000
BBa_K1055000 Version 1 (Component)
mKate is a fluorophor derived from dsRed

BBa_K362004
BBa_K362004 Version 1 (Component)
sodA promoter is controlled by some transcription factors including SoxS.

BBa_K362005
BBa_K362005 Version 1 (Component)
sufA , this promoter is controlled by OxyR.

BBa_K1231000
BBa_K1231000 Version 1 (Component)
The asr promoter is a pH-responsive promoter.

BBa_K176105
BBa_K176105 Version 1 (Component)
constitutive promoter family member J23103 (pCon 0.01) with primer VR5 site

BBa_K779602
BBa_K779602 Version 1 (Component)
Hef1a-TagBFP-FF5 MammoBlock Device

BBa_K362001
BBa_K362001 Version 1 (Component)
ahpC, this promoter is controlled by the OxyR protein.

BBa_J22101
BBa_J22101 Version 1 (Component)
Lac Y gene

BBa_M31538
BBa_M31538 Version 1 (Component)
This is the trio of genes in M13K07 responsible for Genome Amplification

BBa_M31535
BBa_M31535 Version 1 (Component)
This is gene IX of M13K07 (RBS, and ORF)

BBa_M31534
BBa_M31534 Version 1 (Component)
This is gene VII of M13K07 (RBS, and ORF)

BBa_J85900
BBa_J85900 Version 1 (Component)
TRE-tight-B1-LacI-T2A-EBFP2-FF5-miRFF4

BBa_K1114301
BBa_K1114301 Version 1 (Component)
This is MoClo formatted part of BBa_B0015

BBa_K737058
BBa_K737058 Version 1 (Component)
Spot42 is a multitarget small RNA that mediates the discoordinate expression of the E.coli galactose

BBa_K783046
BBa_K783046 Version 1 (Component)
This is a MoClo converted version of BBa_R0010

BBa_M31541
BBa_M31541 Version 1 (Component)
This is the M13K07 genome refactored between the Hap1 and Bam1 Sites

BBa_K1116001
BBa_K1116001 Version 1 (Component)
LacI with miR-FF5 and miR-FF3 target

BBa_K1231002
BBa_K1231002 Version 1 (Component)
Lpp-RBS is a constitutive promoter

BBa_K1401001
BBa_K1401001 Version 1 (Component)
BetI is a repressor gene and TetR homolog

BBa_K1218001
BBa_K1218001 Version 1 (Component)
This is the sacY promoter.

BBa_K176235
BBa_K176235 Version 1 (Component)
For characterization of K176230: VR5+pCon 0.01->K176230

BBa_K209499
BBa_K209499 Version 1 (Component)
pEF5-FRT-V5-DEST

BBa_K362002
BBa_K362002 Version 1 (Component)
dps,this promoter is controlled by OxyR protein

BBa_K094100
BBa_K094100 Version 1 (Component)
cheZ gene

BBa_K737022
BBa_K737022 Version 1 (Component)
This part is gvpC-20 coding gene with GFP mut 3.1 fusion gene