Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_K1896007BBa_K1896007 Version 1 (Component)mGFPuv2 (C-part)
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_K1896006BBa_K1896006 Version 1 (Component)mGFPuv2 (N-part)
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix
BBa_K209006BBa_K209006 Version 1 (Component)Aar1 C-D part, Dd5P2 (aa435-787)
BBa_K209404BBa_K209404 Version 1 (Component)AarI C-D part, ActA (30-612)
BBa_K209410BBa_K209410 Version 1 (Component)AarI C-D part, ActA (255-392)
BBa_K209408BBa_K209408 Version 1 (Component)AarI C-D part, Intersectin (ITSN)
BBa_K209411BBa_K209411 Version 1 (Component)AarI C-D part, Lamellipodin (LPD) (775-1250)
BBa_K209015BBa_K209015 Version 1 (Component)Aar1 C-D part, Inp54p
BBa_K209409BBa_K209409 Version 1 (Component)AarI C-D part, Tuba
RFC105 ZBBa_K1362421 Version 1 (Component)C-terminal stop overhang TAAT=STOP+1/3Stop RFC[105] overhang Z
BBa_K209413BBa_K209413 Version 1 (Component)AarI C-D part, Vav
BBa_K209010BBa_K209010 Version 1 (Component)Aar1 C-D part, RasC da (no CAAX) (Dictyostelium discoideum)
BBa_K209012BBa_K209012 Version 1 (Component)Aar1 C-D part, RasG dn (no CAAX) (Dictyostelium discoideum)
BBa_K209011BBa_K209011 Version 1 (Component)Aar1 C-D part, RasG da (no CAAX) (Dictyostelium discoideum)
BBa_K209477BBa_K209477 Version 1 (Component)AarI B-C part, DOR
NpuDnaE(C)BBa_K1362401 Version 1 (Component)NpuDnaE C-Intein cloning piece
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
BBa_K209009BBa_K209009 Version 1 (Component)Aar1 C-D part, SHIP1 (aa364-826) (Dictyostelium discoideum)
BBa_K209023BBa_K209023 Version 1 (Component)Aar1 C-D part, FKBP
BBa_K209007BBa_K209007 Version 1 (Component)Aar1 C-D part, PI3K1 (full length) (Dictyostelium discoideum)
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K115017BBa_K115017 Version 1 (Component)RNA thermometer (ROSE 32??C)
BBa_K309012BBa_K309012 Version 1 (Component)Unc-54 3' UTR (for use in C. elegans chassis)
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K209016BBa_K209016 Version 1 (Component)Aar1 C-D part, PIPK1 gamma (Dictyostelium discoideum)
BBa_K209475BBa_K209475 Version 1 (Component)AarI C-D part, Actinin1ABD
BBa_K531001BBa_K531001 Version 1 (Component)<i>C. crescentus</i> S-layer RsaA C-term
BBa_K1896010BBa_K1896010 Version 1 (Component)mGFPuv2 generator
c-MycBBa_I712007 Version 1 (Component)c-Myc affinity tag
BBa_K209476BBa_K209476 Version 1 (Component)AarI C-D part, Villin headpiece