Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
vioAvioA Version (Component) BBa_K1114035BBa_K1114035 Version 1 (Component)pVioA in Moclo
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K783020BBa_K783020 Version 1 (Component)MoClo converted version of BBa_B0015
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1114005BBa_K1114005 Version 1 (Component)The MoClo format of BBa_J23104 with AB fusion sites.
BBa_K902023BBa_K902023 Version 1 (Component)Moco Riboswitch
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K1401601BBa_K1401601 Version 1 (Component)C0080_CI, MoClo of BBa_C0080
BBa_K1484002BBa_K1484002 Version 1 (Component)AmajLime chromoprotein in BBa and MoClo standard
BBa_K1484006BBa_K1484006 Version 1 (Component)EforRed chromoprotein in BBa and MoClo standard
BBa_K1484004BBa_K1484004 Version 1 (Component)AmilGFP chromoprotein in BBa and MoClo standard
BBa_K1484007BBa_K1484007 Version 1 (Component)cjBlue chromoprotein in BBa and MoClo standard
BBa_K1484008BBa_K1484008 Version 1 (Component)AeBlue0034 chromoprotein in BBa and MoClo standard
BBa_K1484003BBa_K1484003 Version 1 (Component)AeBlue chromoprotein in BBa and MoClo standard
BBa_K1114301BBa_K1114301 Version 1 (Component)This is MoClo formatted part of BBa_B0015
BBa_K1114202BBa_K1114202 Version 1 (Component)C0040_CD, Moclo of BBA_C0040
BBa_K783046BBa_K783046 Version 1 (Component)This is a MoClo converted version of BBa_R0010
BsaI ->BBa_K1362425 Version 1 (Component)BsaI restriction site for RFC[???] cloning (in part in prefix)
BBa_R0099BBa_R0099 Version 1 (Component)vioA promoter from Chromobacterium Violaceum
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
BBa_R00991BBa_R00991 Version 1 (Component)prm-VioA
BBa_K1114204BBa_K1114204 Version 1 (Component)C0080_CD, Moclo analogue of BBA_C0080
HerEBBa_K1615045 Version 1 (Component)Heroin Esterase in RFC25
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
BBa_J70638BBa_J70638 Version 1 (Component)rbs VioA rbs VioB
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K1484103BBa_K1484103 Version 1 (Component)Benzalacetone Synthase, compatible with MoClo
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
BBa_K309012BBa_K309012 Version 1 (Component)Unc-54 3' UTR (for use in C. elegans chassis)
TVEL5BBa_K1615067 Version 1 (Component)Laccase TVEL5 in RFC25
BBa_K1484107BBa_K1484107 Version 1 (Component)HygR compatible with MOCLO
BBa_J70637BBa_J70637 Version 1 (Component)rbs VioA rbs VioB
BBa_K1114006BBa_K1114006 Version 1 (Component)The MoClo format of BBa_J23104 with EB fusion sites.