SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

lasI
BBa_C0078 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa

lasr
BBa_C0079 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(+LVA)

lasI
BBa_C0178 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

lasR
BBa_C0179 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(no LVA)

rhlR
BBa_C0071 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)

BBa_K2062006
BBa_K2062006 Version 1 (Component)
rhamnosyltransferase 2 [Pseudomonas aeruginosa]

rhIR
BBa_C0171 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)

BBa_K2062005
BBa_K2062005 Version 1 (Component)
Rhamnosyltransferase 1 [Pseudomonas aeruginosa]

BBa_K1331004
BBa_K1331004 Version 1 (Component)
Modified rhlB coding sequence from Pseudomonas aeruginosa SQ6

BBa_K1331001
BBa_K1331001 Version 1 (Component)
Modified rhlA coding sequence from Pseudomonas aeruginosa SQ6

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_K1365120
BBa_K1365120 Version 1 (Component)
anti Pseudomonas aeruginosa secreting system

norC
BBa_K1356004 Version 1 (Component)
Nitric oxide reductase (norC) from Pseudomonas aeruginosa PAO1

nosZ
BBa_K1356006 Version 1 (Component)
Nitrous oxide reductase (nosZ) from Pseudomonas aeruginosa PAO1

BBa_K1593209
BBa_K1593209 Version 1 (Component)
Porin: OprF from Pseudomonas aeruginosa

nirS
BBa_K1356003 Version 1 (Component)
Nitrite Reductase (nirS) from Pseudomonas aeruginosa PAO1

BBa_K1136002
BBa_K1136002 Version 1 (Component)
KZ144 Endolysin from Pseudomonas aeruginosa bacteriophage

BBa_K1067006
BBa_K1067006 Version 1 (Component)
Denitrification operon from Pseudomonas aeruginosa

norB
BBa_K1356005 Version 1 (Component)
Nitric oxide reductase (norB) from Pseudomonas aeruginosa PAO1

rsmA
BBa_K845003 Version 1 (Component)
rsmA gene from Pseudomonas Aeruginosa

BBa_K845004
BBa_K845004 Version 1 (Component)
rsmY gene from Pseudomonas Aeruginosa

BBa_K1683005
BBa_K1683005 Version 1 (Component)
E. coli tolC signaling sequence + Pseudomonas aeruginosa oprM

BBa_K1365130
BBa_K1365130 Version 1 (Component)
anti Pseudomonas aeruginosa analytical secreting system

BBa_K855004
BBa_K855004 Version 1 (Component)
pvdQ gene form pseudomonas aeruginosa PAO1 with his tag added before stop condon

BBa_K1593003
BBa_K1593003 Version 1 (Component)
Chemotaxis related protein cheZ from Pseudomonas aeruginosa

rhlAB
BBa_K424018 Version 1 (Component)
Rhamnosiltransferase BioBrick (Rh1AB_BB)

BBa_K1331002
BBa_K1331002 Version 1 (Component)
RhlR regulatory protein from P. aeruginosa SQ6

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K1331006
BBa_K1331006 Version 1 (Component)
Modified rhlAB coding sequence from Pseudomonas aeruginosa SQ6

oprF
BBa_K1172501 Version 1 (Component)
Outer membrane porin OprF from Pseudomonas fluorescens

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K1331007
BBa_K1331007 Version 1 (Component)
Modified rhlRI coding sequence from Pseudomonas aeruginosa SQ6

phlF
BBa_K1725040 Version 1 (Component)
<i>phlF</i> encoding PhlF repressor from Pseudomonas protegens Pf-5

BBa_K1331005
BBa_K1331005 Version 1 (Component)
Modified rhlABRI operon genes from Pseudomonas aeruginosa SQ6

BBa_K1521000
BBa_K1521000 Version 1 (Component)
Quorum threshold expression element (qteE) from Pseudomonas aeruginosa + SpoVg RBS

BBa_K424006
BBa_K424006 Version 1 (Component)
Rhamnosiltransferase 1 gene (rhlAB)

BBa_K1840004
BBa_K1840004 Version 1 (Component)
mCherry for Pseudomonas

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K1331003
BBa_K1331003 Version 1 (Component)
RhlI Acyl-homoserine-lactone synthase from P.aeruginosa SQ6

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)