Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K1127001BBa_K1127001 Version 1 (Component)A3-Flg IM9 fusion part
BBa_K1127002BBa_K1127002 Version 1 (Component)IM9 and A3-Flg fusion for gold binding
BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
BBa_K2027052BBa_K2027052 Version 1 (Component)Flag-Lumio-HisTag
BBa_I15010BBa_I15010 Version 1 (Component)cph8 (Cph1/EnvZ fusion)
BBa_E0051BBa_E0051 Version 1 (Component)lacZa.GFP fusion
BBa_K125500BBa_K125500 Version 1 (Component)GFP fusion brick
BBa_K1127000BBa_K1127000 Version 1 (Component)A3-Flg Gold binding peptide
BBa_I757011BBa_I757011 Version 1 (Component)bla_frag1(aa 26-199) Fusion Part
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
BBa_K1962005BBa_K1962005 Version 1 (Component)Immunity Protein Im-E9
fusionBBa_I12200 Version 1 (Component)Lambda cI - Gal4 fusion protein
BBa_K1583113BBa_K1583113 Version 1 (Component)pAra + fusion protein BFP_Spycatcher_His
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K864600BBa_K864600 Version 1 (Component)T0 (21 imm) transcriptional terminator
Art175BBa_K1659000 Version 1 (Component)Artilysin Art-175, an antibacterial fusion protein
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
cph8BBa_K592000 Version 1 (Component)cph8 (Cph1/EnvZ fusion)
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_Z0294BBa_Z0294 Version 1 (Component)A1,A2,A3,boxA
FusionBBa_I12201 Version 1 (Component)Alpha-NTD - Gal11p fusion protein
BBa_K255000BBa_K255000 Version 1 (Component)laci-cfp fusion
AraC_14_3CBBa_K627011 Version 1 (Component)Fusion part of pBAD arabinose-inducible induction system and the HRV 14_3C protease
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
BBa_K208006BBa_K208006 Version 1 (Component)HlyA Signal Peptide - Silver Fusion Compatible
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_I757012BBa_I757012 Version 1 (Component)bla_frag2 (aa 200-290) Fusion Part
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
SgsE | CFPBBa_K525306 Version 1 (Component)Fusion Protein of S-Layer SgsE and mCerulean
SbpA | CFPBBa_K525406 Version 1 (Component)Fusion Protein of S-Layer SbpA and mCerulean
SgsE | YFPBBa_K525305 Version 1 (Component)Fusion Protein of S-Layer SgsE and mCitrine
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
BBa_K851000BBa_K851000 Version 1 (Component)A3 Promoter phage ϕ(phi)29