Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1321368BBa_K1321368 Version 1 (Component)CBDclos + NiBP in RFC25 fusion format
BBa_K1321343BBa_K1321343 Version 1 (Component)NiBP fused to CBDclos in RFC 25
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
HerEBBa_K1615045 Version 1 (Component)Heroin Esterase in RFC25
TVEL5BBa_K1615067 Version 1 (Component)Laccase TVEL5 in RFC25
BBa_K1321353BBa_K1321353 Version 1 (Component)NiBP fused to CBDclos driven by T7
BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
BBa_K1321351BBa_K1321351 Version 1 (Component)CBDcenA with linker fused to NiBP in Freiburg format (RFC 25)
mRFPBBa_K1615089 Version 1 (Component)mRFP RFC25
BBa_K1114005BBa_K1114005 Version 1 (Component)The MoClo format of BBa_J23104 with AB fusion sites.
BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
BBa_K1321369BBa_K1321369 Version 1 (Component)CBDcex + NiBP in RFC25
BBa_K112305BBa_K112305 Version 1 (Component){rbs.lambda lysozyme!} in BBb format
BBa_I15010BBa_I15010 Version 1 (Component)cph8 (Cph1/EnvZ fusion)
BBa_K1321344BBa_K1321344 Version 1 (Component)NiBP fused to CBDcex in RFC 25
BBa_K1321341BBa_K1321341 Version 1 (Component)sfGFP fused to CBDclos in RFC 25
BBa_K1615008BBa_K1615008 Version 1 (Component)CBDclos fused to MorA in RFC25
BBa_K1615097BBa_K1615097 Version 1 (Component)CBDclos fused to mRFP in RFC25
BBa_K1615009BBa_K1615009 Version 1 (Component)MorA fused to CBDclos in RFC25
BBa_K1615031BBa_K1615031 Version 1 (Component)MaoA fused to CBDclos in RFC25
BBa_K1615054BBa_K1615054 Version 1 (Component)HerE fused to CBDclos in RFC25
BBa_K1615030BBa_K1615030 Version 1 (Component)CBDclos fused to MaoA in RFC25
BBa_K1615098BBa_K1615098 Version 1 (Component)mRFP fused to CBDclos in RFC25
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
BBa_K1321012BBa_K1321012 Version 1 (Component)fMT metallothionein in Freiburg format (RFC[25])
BBa_K324000BBa_K324000 Version 1 (Component)LacI repressor protein in RFC25 format
MorABBa_K1615000 Version 1 (Component)Morphine-6-dehydrogenase RFC25
MaoABBa_K1615022 Version 1 (Component)Monoamine Oxidase A RFC25
BBa_E0051BBa_E0051 Version 1 (Component)lacZa.GFP fusion
BBa_K1615053BBa_K1615053 Version 1 (Component)CBDclos fused to Heroin Esterase in RFC25
BBa_K809605BBa_K809605 Version 1 (Component)Lambda Holin in BBa format
BBa_K1321162BBa_K1321162 Version 1 (Component)NiBP driven by LacI promoter
BBa_K125500BBa_K125500 Version 1 (Component)GFP fusion brick
BBa_K1321346BBa_K1321346 Version 1 (Component)CBDclos fused to sfGFP in RFC 25
BBa_K1615076BBa_K1615076 Version 1 (Component)TVEL5 fused to CBDclos in RFC25
BBa_K1615075BBa_K1615075 Version 1 (Component)CBDclos fused to TVEL5 in RFC25
scarBBa_K300077 Version 1 (Component)RFC23 scar sequence
BBa_K1321345BBa_K1321345 Version 1 (Component)NiBP fused to dCBD with linker in RFC 25
BBa_K324001BBa_K324001 Version 1 (Component)AraC regulatory protein in RFC25 format
BBa_K1321001BBa_K1321001 Version 1 (Component)sfGFP RFC25 format
BBa_K404319BBa_K404319 Version 1 (Component)Cyan fluorescent protein (CFP) in RFC25 standard