Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K912006BBa_K912006 Version 1 (Component)Intracellular Chloride Ion Inducible Lysis Device
BBa_K112808BBa_K112808 Version 1 (Component)Enterobacteria phage T4 Lysis Device - no promoter
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
PgadBBa_K559011 Version 1 (Component)Pgad - Intracellular Chloride-Sensing Cassette
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K912005BBa_K912005 Version 1 (Component)ClC-ec1 chloride antiporter
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K914003BBa_K914003 Version 1 (Component)L-rhamnose-inducible promoter (pRha)
BBa_K300010BBa_K300010 Version 1 (Component)PoPS-based self-inducible device
BBa_K173015BBa_K173015 Version 1 (Component)HSL inducible lysis device
BBa_J107014BBa_J107014 Version 1 (Component)Heat-inducible lysis device
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K1973033BBa_K1973033 Version 1 (Component)nahR-Psal (inducible promoter)
BBa_J107034BBa_J107034 Version 1 (Component)heat-inducible device
BBa_K358006BBa_K358006 Version 1 (Component)lambda lysis cassette with terminator
BBa_K990005BBa_K990005 Version 1 (Component)LasR Device + T4 Lysis Device
BBa_I0460BBa_I0460 Version 1 (Component)aiiA Device (B0034.C0060.B0015)
BBa_K287003BBa_K287003 Version 1 (Component)Chloride channel protein
BBa_K112802BBa_K112802 Version 1 (Component)T4 phage lysis device
LysisBBa_K137126 Version 1 (Component)Lambda Lysis Cassette
BBa_K1022114BBa_K1022114 Version 1 (Component)pT7 : Lysis Device
BBa_K112019BBa_K112019 Version 1 (Component)Lambda phage lysis device
BBa_K843002BBa_K843002 Version 1 (Component)T4 lysis device with PcI
BBa_K1439009BBa_K1439009 Version 1 (Component)Lysis device induced by L-arabinose
BBa_K317021BBa_K317021 Version 1 (Component)3OC6HSL Regurated T4 Lysis device
BBa_K317016BBa_K317016 Version 1 (Component)IPTG regulated T4 Lysis device
BBa_K317019BBa_K317019 Version 1 (Component)3OC6HSL Regurated T4 Lysis device
BBa_K317020BBa_K317020 Version 1 (Component)3OC6HSL Regurated T4 Lysis device
BBa_K1419001BBa_K1419001 Version 1 (Component)Arabinose inducible lysis casette with RNA-IN
BBa_K1419000BBa_K1419000 Version 1 (Component)Arabinose inducible lysis casette
BBa_K287001BBa_K287001 Version 1 (Component)Chloride Protein
BBa_K419003BBa_K419003 Version 1 (Component)LuxpR- Lysis device without antiHolin
BBa_K1355004BBa_K1355004 Version 1 (Component)Mercury ions bioremediating device
BBa_K1355003BBa_K1355003 Version 1 (Component)Mercury ions accumulator device
BBa_K1355002BBa_K1355002 Version 1 (Component)Mercury ions detector device