SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_B1006BBa_B1006 Version 1 (Component)Terminator (artificial, large, %T~>90)
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_B1001BBa_B1001 Version 1 (Component)Terminator (artifical, small, %T~=90)
ATGATG Version 1 (Component) pBADBBa_K206000 Version 1 (Component)pBAD strong
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
PspaSPspaS_core Version (Component) BBa_K112368BBa_K112368 Version 1 (Component){Pbad}{rbs_ompT>} {< Cre>}{< S-Tag!}{< b1006>}
//ss Version 1 (Collection) His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_B1002BBa_B1002 Version 1 (Component)Terminator (artificial, small, %T~=85%)
BBa_K112348BBa_K112348 Version 1 (Component){rbs_ompT>} {< Cre>}{< S-Tag!}{< b1006>}
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
tADH1BBa_J63002 Version 1 (Component)ADH1 terminator from S. cerevisiae
BBa_K112360BBa_K112360 Version 1 (Component){Pbad}{rbs_ompT>} {< Cre>}{< phoA!}{< b1006>}
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_K112340BBa_K112340 Version 1 (Component){rbs_ompT>} {< Cre>}{< phoA!}{< b1006>}
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
BBa_K112355BBa_K112355 Version 1 (Component){Pbad}{rbs_ompT>}{< phoA!}{< b1006>}
S tagBBa_K112704 Version 1 (Component)<S tag!
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K112335BBa_K112335 Version 1 (Component){rbs_ompT>}{< phoA!}{< b1006>}
BBa_B1005BBa_B1005 Version 1 (Component)Terminator (artificial, small, %T~=25%
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_K228009BBa_K228009 Version 1 (Component)AraC protein(reversed sequence) and Pbad promoter
BBa_K112328BBa_K112328 Version 1 (Component){rbs_ompT>} {< Cre>}
BBa_K112371BBa_K112371 Version 1 (Component){Pbad}{rbs_lamB>} {< r.BglII>}{< S-Tag!}{< b1006>}
BBa_K112369BBa_K112369 Version 1 (Component){Pbad}{rbs_pelB>} {< ligase>}{< S-Tag!}{< b1006>}
BBa_K112370BBa_K112370 Version 1 (Component){Pbad}{rbs_phoApp>}{< r.BamHI>}{< S-Tag!}{< b1006>}
BBa_K112325BBa_K112325 Version 1 (Component){< S-Tag!}{< b1006 >}
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_B1007BBa_B1007 Version 1 (Component)Terminator (artificial, large, %T~=80)
BBa_J44002BBa_J44002 Version 1 (Component)pBAD reverse
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting