SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B1006BBa_B1006 Version 1 (Component)Terminator (artificial, large, %T~>90)
BBa_B1001BBa_B1001 Version 1 (Component)Terminator (artifical, small, %T~=90)
ATGATG Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
PspaSPspaS_core Version (Component) //ss Version 1 (Collection) His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_B1002BBa_B1002 Version 1 (Component)Terminator (artificial, small, %T~=85%)
BBa_K112348BBa_K112348 Version 1 (Component){rbs_ompT>} {< Cre>}{< S-Tag!}{< b1006>}
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
tADH1BBa_J63002 Version 1 (Component)ADH1 terminator from S. cerevisiae
BBa_K112368BBa_K112368 Version 1 (Component){Pbad}{rbs_ompT>} {< Cre>}{< S-Tag!}{< b1006>}
BBa_K112340BBa_K112340 Version 1 (Component){rbs_ompT>} {< Cre>}{< phoA!}{< b1006>}
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
S tagBBa_K112704 Version 1 (Component)<S tag!
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K112360BBa_K112360 Version 1 (Component){Pbad}{rbs_ompT>} {< Cre>}{< phoA!}{< b1006>}
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K112335BBa_K112335 Version 1 (Component){rbs_ompT>}{< phoA!}{< b1006>}
BBa_B1005BBa_B1005 Version 1 (Component)Terminator (artificial, small, %T~=25%
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_K112328BBa_K112328 Version 1 (Component){rbs_ompT>} {< Cre>}
BBa_K112325BBa_K112325 Version 1 (Component){< S-Tag!}{< b1006 >}
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_B1007BBa_B1007 Version 1 (Component)Terminator (artificial, large, %T~=80)
BBa_K112355BBa_K112355 Version 1 (Component){Pbad}{rbs_ompT>}{< phoA!}{< b1006>}
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_K112349BBa_K112349 Version 1 (Component){rbs_pelB>} {< ligase>}{< S-Tag!}{< b1006>}
BBa_K112350BBa_K112350 Version 1 (Component){rbs_phoApp>}{< r.BamHI>}{< S-Tag!}{< b1006>}
BBa_K112351BBa_K112351 Version 1 (Component){rbs_lamB>} {< r.BglII>}{< S-Tag!}{< b1006>}
BBa_K112324BBa_K112324 Version 1 (Component){< phoA!}{< b1006 >} in BBb
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
mnt (s)BBa_C0072 Version 1 (Component)mnt repressor (strong) from Salmonella phage P22 (+LVA)
BBa_B1009BBa_B1009 Version 1 (Component)Terminator (artificial, large, %T~=40%)
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)