iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
PspaSPspaS_core Version (Component) BBa_K359002BBa_K359002 Version 1 (Component)Agr quroum sensing sensor/generator, FepA pore, with P2 + reporter
BBa_I746350BBa_I746350 Version 1 (Component)ogr activator from P2 phage
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
BBa_I746200BBa_I746200 Version 1 (Component)FepA L8T Mutant - Large Diffusion pore for E. coli outer membrane.
BBa_I746000BBa_I746000 Version 1 (Component)AIP generator (agrB + agrD with RBSes)
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
RFC 37BBa_K245119 Version 1 (Component)P2
BBa_I746105BBa_I746105 Version 1 (Component)GFP with agr P2 promoter
BBa_K359001BBa_K359001 Version 1 (Component)AIP sensor and generator with FepA pore
BBa_K359003BBa_K359003 Version 1 (Component)Agr P2 with RFP
BBa_K359007BBa_K359007 Version 1 (Component)AIP sensor with FepA pore
BBa_I746361BBa_I746361 Version 1 (Component)PO promoter from P2 phage
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
BBa_I746101BBa_I746101 Version 1 (Component)I746100 (AIP sensor infrastructure - agrC + agrA with RBSes) + B0015 (Terminator)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_I746001BBa_I746001 Version 1 (Component)I746000 (AIP generator - agrB + agrD with RBSes) + B0015 (Terminator)
BBa_I746103BBa_I746103 Version 1 (Component)I746101 (AIP sensor infrastructure - agrC + agrA with RBSes + Terminator) + I746104 (Inducible P2)
BBa_K748000BBa_K748000 Version 1 (Component)AgrA protein coding sequence. AgrA is the main component of S.aureus agr quorum sensing system.
BBa_K748001BBa_K748001 Version 1 (Component)AgrC protein coding sequence. AgrC is main component of S.aureus agr quorum sensing system.
ArgRBO_11438 Version 1 (Component) BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
BBa_K359005BBa_K359005 Version 1 (Component)Senses AIP and has RFP reporter (from Agr quorum sensing system)
BBa_K274370BBa_K274370 Version 1 (Component)PoPS -> P2 ogr - PF promoter -> PoPS
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_I746313BBa_I746313 Version 1 (Component)arabinose induced expression of P2 ogr and mRFP
BBa_I746372BBa_I746372 Version 1 (Component)P2 ogr inducing PP promoter
BBa_I746371BBa_I746371 Version 1 (Component)P2 ogr inducing PO promoter
BBa_I746370BBa_I746370 Version 1 (Component)P2 ogr inducing PF promoter
BBa_I746107BBa_I746107 Version 1 (Component)I746101 (AIP sensor infrastructure) + I746105 (Inducible P2 + GFP reporter)
BBa_I746360BBa_I746360 Version 1 (Component)PF promoter from P2 phage