SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

BBa_I13453
BBa_I13453 Version 1 (Component)
Pbad promoter

BBa_J61101
BBa_J61101 Version 1 (Component)
Ribosome Binding Site Family Member

pBAD
BBa_K206000 Version 1 (Component)
pBAD strong

LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

BBa_J61120
BBa_J61120 Version 1 (Component)
Ribosome Binding Site Family Member

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_J61100
BBa_J61100 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_I13458
BBa_I13458 Version 1 (Component)
promoter C and arabinose C operon

BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.

BBa_K731201
BBa_K731201 Version 1 (Component)
Arabinose inducible araC-pBAD promoter

lasI
BBa_C0078 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa

BBa_K138002
BBa_K138002 Version 1 (Component)
Arabinose Landing Pad

BBa_K249001
BBa_K249001 Version 1 (Component)
Arabinose Induced Inverter

BBa_I746314
BBa_I746314 Version 1 (Component)
arabinose induced expression of PSP3 pag and mRFP

pBAD
BBa_K1893015 Version 1 (Component)
Arabinose inducible promoter (pBAD)

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_K539711
BBa_K539711 Version 1 (Component)
ilvC (ketol-acid reductoisomerase NAD(P)-binding)

BBa_K1321002
BBa_K1321002 Version 1 (Component)
Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25

RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse

BBa_K1321003
BBa_K1321003 Version 1 (Component)
Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25

araC
BBa_K1088005 Version 1 (Component)
arabinose regulator (araC) coding sequence

Pgad
BBa_K559011 Version 1 (Component)
Pgad - Intracellular Chloride-Sensing Cassette

BBa_K270002
BBa_K270002 Version 1 (Component)
Leucine Landing Pad

BBa_K206001
BBa_K206001 Version 1 (Component)
pBAD weak

GFP
BBa_J5528 Version 1 (Component)
Arabinose -> pBad = GFP

AraC_14_3C
BBa_K627011 Version 1 (Component)
Fusion part of pBAD arabinose-inducible induction system and the HRV 14_3C protease

lasI
BBa_C0178 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)

BBa_K1321009
BBa_K1321009 Version 1 (Component)
Nickel Binding Protein (NiBP) Freiburg format (RFC[25])

BBa_J61127
BBa_J61127 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_K1585999
BBa_K1585999 Version 1 (Component)
lacI binding site

BBa_K1481002
BBa_K1481002 Version 1 (Component)
sfGFP under arabinose promoter

BBa_I746315
BBa_I746315 Version 1 (Component)
arabinose induced expression of phiR73 delta and mRFP

BBa_I746313
BBa_I746313 Version 1 (Component)
arabinose induced expression of P2 ogr and mRFP

BBa_J42022
BBa_J42022 Version 1 (Component)
PolyLinker for Nested Landing Pad

BBa_K1461208
BBa_K1461208 Version 1 (Component)
taRNA (arabinose-induced) (+d.term)

BBa_K112900
BBa_K112900 Version 1 (Component)
Pbad

BBa_K157004
BBa_K157004 Version 1 (Component)
Fluoresceine-A-binding