Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0012
BBa_B0012 Version 1 (Component)
TE from coliphageT7

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_J580003
BBa_J580003 Version 1 (Component)
Cate and Arnau testing the registry

Cat
BBa_I14033 Version 1 (Component)
P(Cat)

BBa_T1002
BBa_T1002 Version 1 (Component)
Testing the categories

BBa_K411000
BBa_K411000 Version 1 (Component)
Testing registry entry. This part doeth not exist.

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

BLp
BBa_K238013 Version 1 (Component)
Exact promoter of the blue light receptor

Hax
BBa_K116999 Version 1 (Component)
Testing registry entry. This part doeth not exist.

BBa_I742151
BBa_I742151 Version 1 (Component)
crtE (geranylgeranyl pyrophosphate synthase) coding sequence.

BBa_K1568005
BBa_K1568005 Version 1 (Component)
testing the part stuff

C2HP/RGE
BBa_K1442107 Version 1 (Component)
C2HP Testing Module (reverse GFP)

OriTR
BBa_J01003 Version 1 (Component)
OriT-R (Origin of transfer for the R-plasmid nic region)

BBa_J100091
BBa_J100091 Version 1 (Component)
For Testing New Promoters via Golden Gate Assembly

CAT
BBa_C0100 Version 1 (Component)
Enzyme, chloramphenicol acetyltransferase or CAT

BBa_J119127
BBa_J119127 Version 1 (Component)
For Testing New Promoters via Golden Gate Assembly with BsmBI

BBa_K530001
BBa_K530001 Version 1 (Component)
CRTE

BBa_K1472603
BBa_K1472603 Version 1 (Component)
testing

BBa_K1472604
BBa_K1472604 Version 1 (Component)
testing

BBa_K1472001
BBa_K1472001 Version 1 (Component)
Testing

BBa_K314000
BBa_K314000 Version 1 (Component)
testing, 123

ThiE
BBa_K558009 Version 1 (Component)
Thiamin monophosphate pyrophosphorylase

BBa_J119139
BBa_J119139 Version 1 (Component)
Device for Testing New Promoters via Golden Gate Assembly

BBa_J100104
BBa_J100104 Version 1 (Component)
For Testing New Promoters via Golden Gate Assembly v2

BBa_J119138
BBa_J119138 Version 1 (Component)
Device for Testing New Promoters via Golden Gate Assembly

BBa_K1695050
BBa_K1695050 Version 1 (Component)
testing

BBa_M11101
BBa_M11101 Version 1 (Component)
testing

BBa_M33000
BBa_M33000 Version 1 (Component)
testing

BBa_K1472605
BBa_K1472605 Version 1 (Component)
testing

CHE
BBa_K256023 Version 1 (Component)
Cholesteryl Esterase (CHE)

BBa_J52997
BBa_J52997 Version 1 (Component)
testing testing 1, 2, 3

BBa_J52998
BBa_J52998 Version 1 (Component)
testing testing 1, 2, 3

BBa_J70016
BBa_J70016 Version 1 (Component)
PpiI Right Testing Part

BBa_J119136
BBa_J119136 Version 1 (Component)
Device for Testing New Promoters via Golden Gate Assembly

BBa_J70015
BBa_J70015 Version 1 (Component)
PpiI and PsrI LASR Left Testing Part

BBa_K1867003
BBa_K1867003 Version 1 (Component)
testing