SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
ATGATG Version 1 (Component) Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
DioxyBBa_K1688022 Version 1 (Component)Catechol 1,2 Dioxygenase + HlyA export tag
BBa_I15008BBa_I15008 Version 1 (Component)heme oxygenase (ho1) from Synechocystis
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
BBa_K316003BBa_K316003 Version 1 (Component)XylE - catechol 2,3-dioxygenase from P.putida with terminator
BBa_K223034BBa_K223034 Version 1 (Component)trp-operon + RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT (Trp-sensitive HlyA exporter)
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K223030BBa_K223030 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
BBa_K223029BBa_K223029 Version 1 (Component)HlyR + HlyC + HlyB + HlyD + TT
PESTBBa_J176018 Version 1 (Component)PEST
BBa_K223031BBa_K223031 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K1166002BBa_K1166002 Version 1 (Component)HlyA-tag+Secretion system
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_M1528BBa_M1528 Version 1 (Component)RBS + HlyB + RBS + HlyD
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K223025BBa_K223025 Version 1 (Component)HlyR + HlyC + Hly B + Hly D
BBa_K331014BBa_K331014 Version 1 (Component)IPTG Inducible Catechol 1,2-dioxygenase with N-terminal Arginine Tag
BBa_K331015BBa_K331015 Version 1 (Component)IPTG Inducible Catechol 1,2-dioxygenase with C-terminal Arginine Tag
ModLacBBa_K1688020 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag
BBa_K808033BBa_K808033 Version 1 (Component)araC-Pbad regulated XylE - catechol 2,3-dioxygenase from P.putida with terminator
BBa_K1688006BBa_K1688006 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag (inc RBS)
BBa_K331011BBa_K331011 Version 1 (Component)Catechol 2,3-dioxygenase with a C-terminus arginine tag
BBa_K331010BBa_K331010 Version 1 (Component)Catechol 2,3-dioxygenase with a N-terminus arginine tag
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_K2088000BBa_K2088000 Version 1 (Component)catechol 2,3-dioxygenase gene
BBa_K192099BBa_K192099 Version 1 (Component)catechol 1 2-dioxygenase
BBa_J331025BBa_J331025 Version 1 (Component)Anthranilate 1,2-dioxygenase - Small Subunit
BBa_J331024BBa_J331024 Version 1 (Component)anthranilate 1,2-dioxygenase - Large Subunit
BBa_K2013011BBa_K2013011 Version 1 (Component)TPA 1,2-dioxygenase
BBa_K2013009BBa_K2013009 Version 1 (Component)TPA 1,2-dioxygenase
BBa_K2013008BBa_K2013008 Version 1 (Component)TPA 1,2-dioxygenase
BBa_K357000BBa_K357000 Version 1 (Component)catechol 1 2-dioxygenase
BBa_K192100BBa_K192100 Version 1 (Component)catechol 1 2-dioxygenase
BBa_K2018023BBa_K2018023 Version 1 (Component)hlyA secretion tag
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BBa_K1392910BBa_K1392910 Version 1 (Component)with L+ arabinose promoter, caterchol 2,3-dioxygenase activate to degration of catechol.
BBa_K2088008BBa_K2088008 Version 1 (Component)catechol 2,3-dioxygenase gene with native rbs
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)