Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

tADH1
BBa_J63002 Version 1 (Component)
ADH1 terminator from S. cerevisiae

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_J14465
BBa_J14465 Version 1 (Component)
Composite part comprised of J13002 and I13401

BBa_J14463
BBa_J14463 Version 1 (Component)
Composite part comprised of J13002 and I13501

BBa_I13003
BBa_I13003 Version 1 (Component)
medium RBS, YFP (-LVA), double terminator

BBa_I13001
BBa_I13001 Version 1 (Component)
RBS B0030 w/ YFP (-LVA) TT

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_J14458
BBa_J14458 Version 1 (Component)
Composite part comprised of J04500 and I13401

BBa_I13002
BBa_I13002 Version 1 (Component)
RBS B0031 w/ YFP (-LVA) TT

BBa_J14467
BBa_J14467 Version 1 (Component)
Composite part comprised of I6032 and I13601

mRFP1
BBa_I13502 Version 1 (Component)
Screening plasmid intermediate

BBa_J14461
BBa_J14461 Version 1 (Component)
Composite part comprised of R0051 and I13507

BBa_J14466
BBa_J14466 Version 1 (Component)
Composite part comprised of I6031 and I13600

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

BBa_I13602
BBa_I13602 Version 1 (Component)
Tet operator with CFP reporter (with LVA tag) [R/Tc+]

BBa_J14453
BBa_J14453 Version 1 (Component)
Composite part comprised of S01022.B0015

BBa_J14451
BBa_J14451 Version 1 (Component)
Composite part comprised of I13025 and I13026

BBa_J14455
BBa_J14455 Version 1 (Component)
Composite part comprised of E0030 and B0015

BBa_J14454
BBa_J14454 Version 1 (Component)
Composite part comprised of E0020 and B0015

BBa_J14457
BBa_J14457 Version 1 (Component)
Composite part comprised of R0010 and E0422

BBa_I13501
BBa_I13501 Version 1 (Component)
Screening plasmid intermediate

BBa_I13402
BBa_I13402 Version 1 (Component)
GFP+Pbad CFP

link
BBa_I13000 Version 1 (Component)
linker sequence between lux systems

BBa_I3425
BBa_I3425 Version 1 (Component)
Test: Switch aspartate excretion (I3410.I3200.I3411.E0432.I3100.I3400.I3101.I3400.I3102.I3401)

BBa_I3424
BBa_I3424 Version 1 (Component)
Test: Switch response to quorum (I3410.E0422.I3411.E0432.I3100.I3400.I3101.I3400.I3510.I3401)

BBa_I13005
BBa_I13005 Version 1 (Component)
Promoter R0011 w/ YFP (-LVA) TT

BBa_I13007
BBa_I13007 Version 1 (Component)
RBS Test R0011.B0030.E0130

BBa_I13008
BBa_I13008 Version 1 (Component)
RBS Test R0011.B0031.E0130

BBa_I13004
BBa_I13004 Version 1 (Component)
RBS B0033 w/ YFP (-LVA) TT

LuxR/P
BBa_I13201 Version 1 (Component)
Natural Lux Promoter Preceded by LuxR

BBa_I13012
BBa_I13012 Version 1 (Component)
RBS Test R0040.B0031.E0130