SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_K650005BBa_K650005 Version 1 (Component)D. rad RecA (DR_2340)
YqzLBO_2340 Version 1 (Component) BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K650006BBa_K650006 Version 1 (Component)D. rad RecO (DR_0819)
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_J22106BBa_J22106 Version 1 (Component)rec A (SOS) Promoter
eforRedBBa_K592012 Version 1 (Component)eforRed, red chromoprotein
"D"BBa_K1080002 Version 1 (Component)ChlD
BBa_K650000BBa_K650000 Version 1 (Component)D. rad MntH (DR_1709)
BBa_K650003BBa_K650003 Version 1 (Component)D. rad PprI (DR_0167)
BBa_K650002BBa_K650002 Version 1 (Component)D. rad Dps2 (DR_B0092)
BBa_K650001BBa_K650001 Version 1 (Component)D. rad Dps1 (DR_2263)
BBa_K650004BBa_K650004 Version 1 (Component)D. rad PprA (DR_A0346)
BBa_K106017BBa_K106017 Version 1 (Component)AarI "D" site scar sequence
precABBa_K1407099 Version 1 (Component)recA promoter
BBa_K554008BBa_K554008 Version 1 (Component)Hemolysin D - HlyD
PT7-DBBa_I716106 Version 1 (Component)T7 Promoter (Mutant D)
BBa_K602003BBa_K602003 Version 1 (Component)<i>Deinococcus radiodurans</i> RecA
BBa_K602008BBa_K602008 Version 1 (Component)<i>D. radiodurans</i> RecA expression device
recABO_28940 Version 1 (Component) BBa_I766217BBa_I766217 Version 1 (Component)Stop-D-BamHI-Adh Terminator Adaptor
recABO_2896 Version 1 (Component) BBa_K602017BBa_K602017 Version 1 (Component)<i>D. radiodurans</i> PprA+RecA expression device
BBa_K602016BBa_K602016 Version 1 (Component)<i>D. radiodurans</i> PprI+RecA expression device
BBa_K602020BBa_K602020 Version 1 (Component)<i>D. radiodurans</i> PprM+RecA expression device
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix
BBa_K648101BBa_K648101 Version 1 (Component)RecA (mutated from RecA1 at amino acid 160 G-->A
recApBBa_K629001 Version 1 (Component)recAp, could be started with exposure to irradiation, UV, nalidixic acid
BBa_K209006BBa_K209006 Version 1 (Component)Aar1 C-D part, Dd5P2 (aa435-787)
recAp-cheZBBa_K629010 Version 1 (Component)recAp-cheZ-eGFP
BBa_K209404BBa_K209404 Version 1 (Component)AarI C-D part, ActA (30-612)
BBa_K209410BBa_K209410 Version 1 (Component)AarI C-D part, ActA (255-392)
BBa_K648009BBa_K648009 Version 1 (Component)RecA Cleavage Site with Standard 25 Prefix/Suffix
BBa_K1520500BBa_K1520500 Version 1 (Component)red fluorescent protein
rocABO_3387 Version 1 (Component) Cytosine DBBa_J32019 Version 1 (Component)Cytosine Deaminase WSU