Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
mChBBa_J176005 Version 1 (Component)mCh
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
ATGATG Version 1 (Component) BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
fshPCDBBa_J176002 Version 1 (Component)fshPCD
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
CcpABO_11480 Version 1 (Component) BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
LexABO_11408 Version 1 (Component) BBa_K2027052BBa_K2027052 Version 1 (Component)Flag-Lumio-HisTag
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
ComKBO_11197 Version 1 (Component) YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
VP64BBa_J176013 Version 1 (Component)VP64
SpoIILBO_26996 Version 1 (Component) AbrBBO_9091 Version 1 (Component) BBa_K2027070BBa_K2027070 Version 1 (Component)Cellulose Binding Domain
GerEBO_11469 Version 1 (Component) BBa_K2027035BBa_K2027035 Version 1 (Component)LeorOrange-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
TnrABO_11240 Version 1 (Component) SpoIIIDBO_9027 Version 1 (Component) FurBO_11498 Version 1 (Component) PhoPBO_26226 Version 1 (Component) BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
PLflexBBa_J176040 Version 1 (Component)PLflex
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K2027025BBa_K2027025 Version 1 (Component)LeorOrange-Flag-Lumio-His-tag Fusion Protein
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K2027033BBa_K2027033 Version 1 (Component)BlitzenBlue-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027027BBa_K2027027 Version 1 (Component)CupidPink-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027042BBa_K2027042 Version 1 (Component)ScoogeOrange-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027043BBa_K2027043 Version 1 (Component)SeraphinaPink-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027032BBa_K2027032 Version 1 (Component)DonnerMagenta-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027028BBa_K2027028 Version 1 (Component)PrancerPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027031BBa_K2027031 Version 1 (Component)VirginiaViolet-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027029BBa_K2027029 Version 1 (Component)VixenPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027041BBa_K2027041 Version 1 (Component)DreidelTeal-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027030BBa_K2027030 Version 1 (Component)TinselPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein