SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K2066019
BBa_K2066019 Version 1 (Component)
UNS 3 Sequence, from Torella et al., 2013

BBa_K264001
BBa_K264001 Version 1 (Component)
Modular UP-element Design 2

BBa_K264003
BBa_K264003 Version 1 (Component)
Modular UP-element Design 4

BBa_K264002
BBa_K264002 Version 1 (Component)
Modular UP-element Design 3

BBa_K264000
BBa_K264000 Version 1 (Component)
Modular UP-element Design 1

BBa_K264006
BBa_K264006 Version 1 (Component)
Modular UP-element Design 7

BBa_K264004
BBa_K264004 Version 1 (Component)
Modular UP-element Design 5

BBa_K264005
BBa_K264005 Version 1 (Component)
Modular UP-element Design 6

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

UPcox1
BBa_K809003 Version 1 (Component)
Up elements of cox1 gene

BBa_K264012
BBa_K264012 Version 1 (Component)
Up Element design 3 with constitutive promoter BBa_J23101

BBa_K264046
BBa_K264046 Version 1 (Component)
UP Element Design 5 with BBa_J23101

BBa_K264047
BBa_K264047 Version 1 (Component)
UP Element Design 6 with BBa_J23101

BBa_K264048
BBa_K264048 Version 1 (Component)
UP Element Design 7 with BBa_J23101

BBa_K264045
BBa_K264045 Version 1 (Component)
UP Element Design 4 with BBa_J23101

BBa_K264014
BBa_K264014 Version 1 (Component)
Up Element design 5 with constitutive promoter BBa_J23101

BBa_K264015
BBa_K264015 Version 1 (Component)
Up Element design 6 with constitutive promoter BBa_J23101

BBa_K264013
BBa_K264013 Version 1 (Component)
Up Element design 4 with constitutive promoter BBa_J23101

BBa_K264007
BBa_K264007 Version 1 (Component)
Up Element design 1 with constitutive promoter BBa_J23101

BBa_K264016
BBa_K264016 Version 1 (Component)
Up Element design 7 with constitutive promoter BBa_J23101

BBa_K264010
BBa_K264010 Version 1 (Component)
Up Element design 2 with constitutive promoter BBa_J23112

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K1763001
BBa_K1763001 Version 1 (Component)
Apis mellifera (honeybee) silk fibroin 3 with regulatory elements

Up
BBa_K1642005 Version 1 (Component)
Upstream sequence from slr0168

fliC_MCS
BBa_K1617000 Version 1 (Component)
Modular Flagellin - FliC_MCS

Kozak & st
BBa_J63003 Version 1 (Component)
designed yeast Kozak sequence

HP3 3
BBa_B0101 Version 1 (Component)
HP3 3

BBa_K309012
BBa_K309012 Version 1 (Component)
Unc-54 3' UTR (for use in C. elegans chassis)

BBa_I4003
BBa_I4003 Version 1 (Component)
Prakash: Design 3

BBa_K1456004
BBa_K1456004 Version 1 (Component)
Hypoxia Response Element(HRE)

BBa_I4203
BBa_I4203 Version 1 (Component)
Prakash *: Synchronator Design 3

BBa_K165011
BBa_K165011 Version 1 (Component)
Zif268-HIV binding sites (3)

BBa_I4213
BBa_I4213 Version 1 (Component)
Synchronator design 3, Output-

BBa_K264022
BBa_K264022 Version 1 (Component)
Up Element BBa_K264003/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264023
BBa_K264023 Version 1 (Component)
Up Element BBa_K264004/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264021
BBa_K264021 Version 1 (Component)
Up Element BBa_K264002/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264020
BBa_K264020 Version 1 (Component)
Up Element BBa_K264001/Constitutive promoter BBa_J23112/RFP reporter BBa_J06702

BBa_K264024
BBa_K264024 Version 1 (Component)
Up Element BBa_K264005/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264017
BBa_K264017 Version 1 (Component)
Up Element BBa_K264000/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264025
BBa_K264025 Version 1 (Component)
Up Element BBa_K264006/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

BBa_K264018
BBa_K264018 Version 1 (Component)
Up Element BBa_K264001/Constitutive promoter BBa_J23119/RFP reporter BBa_J06702

BBa_K264019
BBa_K264019 Version 1 (Component)
Up Element BBa_K264001/Constitutive promoter BBa_J23101/RFP reporter BBa_J06702

RFC105 NN
BBa_K1362415 Version 1 (Component)
N-terminal splicing overhang TGCT=Cys+1/3 Leu|Ile RFC[105] overhang NN

BBa_M36042
BBa_M36042 Version 1 (Component)
EfeU elemental iron (II) transporter

BBa_K1763424
BBa_K1763424 Version 1 (Component)
MaSp2-3(1C3)