iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_K823003BBa_K823003 Version 1 (Component)P<sub>veg</sub>
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K823002BBa_K823002 Version 1 (Component)P<sub>lepA</sub>
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
BBa_K823000BBa_K823000 Version 1 (Component)P<sub>liaG</sub>
BBa_K1379000BBa_K1379000 Version 1 (Component)P<sub>celA</sub>
BBa_K1379002BBa_K1379002 Version 1 (Component)P<sub>celA</sub>-E0240 (Measurement Kit for P<sub>celA</sub>)
BBa_K1379005BBa_K1379005 Version 1 (Component)σ<sup>x</sup> Generator + P<sub>celA</sub>-E0240
CatBBa_I14033 Version 1 (Component)P(Cat)
LacIBBa_K143033 Version 1 (Component)LacI (Lva<sup>-</sup>, N-terminal deletion) regulatory protein
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_K1379007BBa_K1379007 Version 1 (Component)σ<sup>x</sup> Generator + P<sub>comFA</sub>-E0240
BBa_K1379003BBa_K1379003 Version 1 (Component)P<sub>comFA</sub>-E0240 (Measurement Kit for P<sub>comFA</sub>)
BBa_K1682004BBa_K1682004 Version 1 (Component)<i>P<sub>kdpF</sub>[-15, T>G]</i>
BBa_K1379001BBa_K1379001 Version 1 (Component)P<sub>comFA</sub>
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
BBa_K823001BBa_K823001 Version 1 (Component)P<sub><i>liaI</i></sub> promoter of <i>Bacillus subtilis</i>
RhIBBa_I14017 Version 1 (Component)P(Rhl)
BBa_I13202BBa_I13202 Version 1 (Component)3OC<sub>6</sub>HSL Sender Controlled by Lac Repressible Promoter
pSBBs4SBBa_K823024 Version 1 (Component)pSB<sub>Bs</sub>4S-P<i><sub>xyl</i></sub>: Integrative expression vector for <i>Bacillus subtilis</i
BBa_K145106BBa_K145106 Version 1 (Component)cI P<sub>RM</sub> PoPS -> Lactonase
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
P<sub>AtpIBBa_K1930005 Version 1 (Component)P<sub>AtpI</sub>
BBa_K1682000BBa_K1682000 Version 1 (Component)<i>P<sub>kdpF</sub></i>
rhlRBBa_C0071 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)
P<sub>kdpFBBa_K1682001 Version 1 (Component)P<sub>kdpF</sub>-native RBS
pSBBs0KBBa_K823026 Version 1 (Component)pSB<sub>Bs</sub>0K-P<sub>spac</sub> (replicative Bacillus subtilis expression vector; IPTG inducible
BBa_K531007BBa_K531007 Version 1 (Component)P<sub>rsaA</sub> constitutive promoter, <i>esp</i> optimized for <i>Caulobacter</i>, and <i>rsaA</i>
BBa_K1682017BBa_K1682017 Version 1 (Component)P<sub>araBAD</sub>-GFP-P<sub>lac</sub>-RFP
BBa_S03532BBa_S03532 Version 1 (Component)TetB-RBS<sub>rev</sub>
BBa_K145005BBa_K145005 Version 1 (Component)T7 PoPS + P<sub>R</sub> -> cI
BBa_K145006BBa_K145006 Version 1 (Component)Lactonase under P<sub>RM</sub> control
BBa_K145009BBa_K145009 Version 1 (Component)Lux P<sub>R</sub> PoPS -> ccdB
BBa_K1682002BBa_K1682002 Version 1 (Component)<i>P<sub>kdpF</sub>[-15, T>A]</i>