SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

BBa_J85600
BBa_J85600 Version 1 (Component)
attB1 recombination site

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K886001
BBa_K886001 Version 1 (Component)
Recombination Device composed by lox71-Cre recombinase

Cre
BBa_J61047 Version 1 (Component)
Cre DNA recombinase

lox71
BBa_I718017 Version 1 (Component)
lox71

BBa_K886003
BBa_K886003 Version 1 (Component)
Recombination Device composed by Cre-lox71

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

lox
BBa_J61046 Version 1 (Component)
[Lox] site for recombination

BBa_K886000
BBa_K886000 Version 1 (Component)
Fixed lox71

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

BBa_F2622
BBa_F2622 Version 1 (Component)
3OC₆HSL Receiver Device

pRE
BBa_K116603 Version 1 (Component)
pRE promoter from λ phage

BBa_K886002
BBa_K886002 Version 1 (Component)
Recombination Device composed by Cre-lox71

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

Pcar
BBa_K861171 Version 1 (Component)
Pcar, synthetic promoter repressed by CRP

BBa_T9002
BBa_T9002 Version 1 (Component)
GFP Producer Controlled by 3OC6HSL Receiver Device

BBa_I718012
BBa_I718012 Version 1 (Component)
ptet-lox71-ter

BBa_F2621
BBa_F2621 Version 1 (Component)
3OC₆HSL Receiver Device

cre
BBa_K112102 Version 1 (Component)
Cre enzyme without start or stop codons

BBa_K112808
BBa_K112808 Version 1 (Component)
Enterobacteria phage T4 Lysis Device - no promoter

BBa_I0460
BBa_I0460 Version 1 (Component)
aiiA Device (B0034.C0060.B0015)

BBa_I718009
BBa_I718009 Version 1 (Component)
pTet-lox71-rbs-gfp-ter

BBa_K750000
BBa_K750000 Version 1 (Component)
pBADGLT:unstable gfp expression device activated by arabinose

RS1
BBa_K743000 Version 1 (Component)
Synechocystis PCC6803 neutral recombination site.

BBa_K313011
BBa_K313011 Version 1 (Component)
lox2272 site for Cre recombination

CHE
BBa_K256023 Version 1 (Component)
Cholesteryl Esterase (CHE)

BBa_I741018
BBa_I741018 Version 1 (Component)
Right facing promoter (for xylF) controlled by xylR and CRP-cAMP

RS2
BBa_K743001 Version 1 (Component)
Synechocystis PCC6803 neutral recombination site.

pLac+GFP
BBa_I763004 Version 1 (Component)
GFP coding device switched on by IPTG

CRP
BBa_J58112 Version 1 (Component)
CRP protein

BBa_I718008
BBa_I718008 Version 1 (Component)
araC-pBad-rbs-cre

Cre
BBa_I716438 Version 1 (Component)
{rbs1-A}{GTG.Cre}{b0015 TT}

CWE
BBa_K1362433 Version 1 (Component)
CWE (extein)

BBa_K1368005
BBa_K1368005 Version 1 (Component)
pluxR+lox71+luxI

pCMV+LacI+
BBa_I763009 Version 1 (Component)
ECFP coding device regulated by pCMV Promoter

CreA
BBa_I715000 Version 1 (Component)
Amino Half of Cre Recombinase (aka CreA)

CreB
BBa_I715001 Version 1 (Component)
Carboxl Half of Cre Recombinase (aka CreB)

BBa_K1151006
BBa_K1151006 Version 1 (Component)
HpNikR coding device

BBa_K1424000
BBa_K1424000 Version 1 (Component)
Prefix homologous recombination for Synechocystis ("Left flank")