iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
ATGATG Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SpacerSpacer Version 1 (Component) Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K844006BBa_K844006 Version 1 (Component)Spider Silk 1x Subunit "W" with Met (ATG) start codon
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
BBa_K844007BBa_K844007 Version 1 (Component)Spider Silk 1x Subunit "F" (Fewest tRNA codon optimized) with Met (ATG) added
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K844008BBa_K844008 Version 1 (Component)Spider Silk 1x Subunit "B" (Balanced tRNA codon optimized) with Met (ATG) added
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K844004BBa_K844004 Version 1 (Component)Spider Silk 1x Subunit "B" (Balanced tRNA codon optimized)
BBa_K844005BBa_K844005 Version 1 (Component)Spider Silk 1x 1E Subunit "U" with Met (ATG) start codon
BBa_K844002BBa_K844002 Version 1 (Component)Spider Silk 1x Subunit "W" (native sequence)
BBa_K844003BBa_K844003 Version 1 (Component)Spider Silk 1x Subunit "F" (Fewest tRNA codon optimized)
BBa_K2066518BBa_K2066518 Version 1 (Component)mCherry (with start codon)
BBa_M36009BBa_M36009 Version 1 (Component)5' Bicistronic UTR (strong), does not include ATG start
mnt (w)BBa_C0073 Version 1 (Component)mnt repressor (weak) from Salmonella phage P22 (+LVA)
BBa_K1333002BBa_K1333002 Version 1 (Component)M13 bacteriophage g3p with start codon of "ATG" and a FLAG tag on C-terminal
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
T7rnapBBa_I716103 Version 1 (Component)T7rnap (T7 RNA Polymerase) - ATG Start Codon
BBa_K844001BBa_K844001 Version 1 (Component)Spider Silk 1x 1E Subunit "U" (native sequence)
BBa_M1718BBa_M1718 Version 1 (Component)Optimized Hepcidin + 1x spider silk
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
BBa_M36282BBa_M36282 Version 1 (Component)5' Bicistronic UTR, includes ATG start codon
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
PatgF1GFPBBa_K844015 Version 1 (Component)lac/IPTG inducible Spider Silk 1x "F" Subunit fused to GFP
BBa_I13602BBa_I13602 Version 1 (Component)Tet operator with CFP reporter (with LVA tag) [R/Tc+]
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
MGSSBBa_K1362445 Version 1 (Component)Start codon and GSS spacer
BBa_M45712BBa_M45712 Version 1 (Component)Hd1a toxin from Haplopelma doriae spider with start codon
MGSSBBa_K1362446 Version 1 (Component)Start codon and GSS spacer
BBa_K323217BBa_K323217 Version 1 (Component)T7 promoter with start codon and hexahistidine tag
BBa_I13600BBa_I13600 Version 1 (Component)Tet with CFP reporter (without LVA tag)
BBa_I716210BBa_I716210 Version 1 (Component)BamHI endonuclease without start codon
BBa_J36841BBa_J36841 Version 1 (Component)Streptavidin, wild-type core + His6 tag (no start codon)
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A