SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lasI
BBa_C0078 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lasr
BBa_C0079 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(+LVA)

lasI
BBa_C0178 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)

BBa_K1365120
BBa_K1365120 Version 1 (Component)
anti Pseudomonas aeruginosa secreting system

lasR
BBa_C0179 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(no LVA)

rhlR
BBa_C0071 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)

BBa_K1365130
BBa_K1365130 Version 1 (Component)
anti Pseudomonas aeruginosa analytical secreting system

rhIR
BBa_C0171 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)

BBa_K1331004
BBa_K1331004 Version 1 (Component)
Modified rhlB coding sequence from Pseudomonas aeruginosa SQ6

BBa_K1331001
BBa_K1331001 Version 1 (Component)
Modified rhlA coding sequence from Pseudomonas aeruginosa SQ6

norC
BBa_K1356004 Version 1 (Component)
Nitric oxide reductase (norC) from Pseudomonas aeruginosa PAO1

BBa_K1365100
BBa_K1365100 Version 1 (Component)
anti Staphylococcus aureus Secretion system

BBa_K1166002
BBa_K1166002 Version 1 (Component)
HlyA-tag+Secretion system

nosZ
BBa_K1356006 Version 1 (Component)
Nitrous oxide reductase (nosZ) from Pseudomonas aeruginosa PAO1

BBa_K1593209
BBa_K1593209 Version 1 (Component)
Porin: OprF from Pseudomonas aeruginosa

BBa_K2062006
BBa_K2062006 Version 1 (Component)
rhamnosyltransferase 2 [Pseudomonas aeruginosa]

BBa_K2062005
BBa_K2062005 Version 1 (Component)
Rhamnosyltransferase 1 [Pseudomonas aeruginosa]

nirS
BBa_K1356003 Version 1 (Component)
Nitrite Reductase (nirS) from Pseudomonas aeruginosa PAO1

BBa_K1136002
BBa_K1136002 Version 1 (Component)
KZ144 Endolysin from Pseudomonas aeruginosa bacteriophage

BBa_K1067006
BBa_K1067006 Version 1 (Component)
Denitrification operon from Pseudomonas aeruginosa

norB
BBa_K1356005 Version 1 (Component)
Nitric oxide reductase (norB) from Pseudomonas aeruginosa PAO1

rsmA
BBa_K845003 Version 1 (Component)
rsmA gene from Pseudomonas Aeruginosa

BBa_K845004
BBa_K845004 Version 1 (Component)
rsmY gene from Pseudomonas Aeruginosa

BBa_K1683005
BBa_K1683005 Version 1 (Component)
E. coli tolC signaling sequence + Pseudomonas aeruginosa oprM

BBa_K1940000
BBa_K1940000 Version 1 (Component)
anti-microRNA-34c

BBa_K2018030
BBa_K2018030 Version 1 (Component)
Secretion system

BBa_K855004
BBa_K855004 Version 1 (Component)
pvdQ gene form pseudomonas aeruginosa PAO1 with his tag added before stop condon

BBa_K1593003
BBa_K1593003 Version 1 (Component)
Chemotaxis related protein cheZ from Pseudomonas aeruginosa

BBa_K1331002
BBa_K1331002 Version 1 (Component)
RhlR regulatory protein from P. aeruginosa SQ6

oprF
BBa_K1172501 Version 1 (Component)
Outer membrane porin OprF from Pseudomonas fluorescens

BBa_K1331006
BBa_K1331006 Version 1 (Component)
Modified rhlAB coding sequence from Pseudomonas aeruginosa SQ6

BBa_K416003
BBa_K416003 Version 1 (Component)
Yeast Secretion Tag

BBa_K1331007
BBa_K1331007 Version 1 (Component)
Modified rhlRI coding sequence from Pseudomonas aeruginosa SQ6

phlF
BBa_K1725040 Version 1 (Component)
<i>phlF</i> encoding PhlF repressor from Pseudomonas protegens Pf-5

BBa_K1331005
BBa_K1331005 Version 1 (Component)
Modified rhlABRI operon genes from Pseudomonas aeruginosa SQ6

BBa_K554002
BBa_K554002 Version 1 (Component)
HlyA secretion signal peptide

TonB
BBa_I765003 Version 1 (Component)
TonB ferric siderophore transport system, periplasmic binding protein TonB [ Pseudomonas entomophila

BBa_K1521000
BBa_K1521000 Version 1 (Component)
Quorum threshold expression element (qteE) from Pseudomonas aeruginosa + SpoVg RBS

BBa_K1840004
BBa_K1840004 Version 1 (Component)
mCherry for Pseudomonas

UNIK Antif
BBa_K1825000 Version 1 (Component)
UNIK antifreeze protein

BBa_K1893014
BBa_K1893014 Version 1 (Component)
anti-STAR

BBa_I712011
BBa_I712011 Version 1 (Component)
CUb (split ubiquitin system)

BBa_K284150
BBa_K284150 Version 1 (Component)
Alpha Hemolysin Secretion System

BBa_K215107
BBa_K215107 Version 1 (Component)
Extracellular Secretion System

BBa_K541505
BBa_K541505 Version 1 (Component)
limulus anti-LPS factor (LALF)

BBa_K1331003
BBa_K1331003 Version 1 (Component)
RhlI Acyl-homoserine-lactone synthase from P.aeruginosa SQ6