iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K392036BBa_K392036 Version 1 (Component)endoglucanase/CBM secretion testing construct for yeast
FurBO_11498 Version 1 (Component) BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
BBa_K392045BBa_K392045 Version 1 (Component)endoglucanase secretion testing construct for yeast
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K392040BBa_K392040 Version 1 (Component)endoglucanase/CBM secretion testing construct for E. coli
BBa_K392042BBa_K392042 Version 1 (Component)exoglucanase/CBM secretion testing construct for E. coli
BBa_K801012BBa_K801012 Version 1 (Component)ADH1 yeast terminator
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
BBa_K392039BBa_K392039 Version 1 (Component)endoglucanase secretion testing construct for E. coli
BBa_K392041BBa_K392041 Version 1 (Component)exoglucanase secretion testing construct for E. coli
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_K392037BBa_K392037 Version 1 (Component)exoglucanase surface display testing construct for yeast
BBa_K165010BBa_K165010 Version 1 (Component)ADH1 yeast transcription terminator
BBa_K392044BBa_K392044 Version 1 (Component)beta-glucosidase/CBM secretion testing construct for E. coli
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
BBa_K392030BBa_K392030 Version 1 (Component)yeast secretion tag + C. fermi endoglucanase
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_K392003BBa_K392003 Version 1 (Component)yeast ADH1 terminator
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_K392031BBa_K392031 Version 1 (Component)yeast secretion tag + C. fermi exoglucanase
Cel5ABBa_K805011 Version 1 (Component)Cel5A, endoglucanases
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K392043BBa_K392043 Version 1 (Component)beta-glucosidase secretion testing construct for E. coli
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR