Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
p15ABBa_I50032 Version 1 (Component)p15A replication origin
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
YAP1BBa_K813000 Version 1 (Component)YAP1 - Yeast Genomic IRES
BBa_K813002BBa_K813002 Version 1 (Component)HAP4 - Yeast Genomic IRES
BBa_K813001BBa_K813001 Version 1 (Component)URE2 - Yeast Genomic IRES
BBa_K801012BBa_K801012 Version 1 (Component)ADH1 yeast terminator
BBa_K813004BBa_K813004 Version 1 (Component)p150 - Yeast Genomic IRES
BBa_K165010BBa_K165010 Version 1 (Component)ADH1 yeast transcription terminator
BBa_K813003BBa_K813003 Version 1 (Component)pSAP - Yeast Genomic IRES
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_K392003BBa_K392003 Version 1 (Component)yeast ADH1 terminator
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K530008BBa_K530008 Version 1 (Component)TDH3 Yeast Promoter
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
P0310BBa_J63005 Version 1 (Component)yeast ADH1 promoter
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_E2030BBa_E2030 Version 1 (Component)enhanced version of EYFP, yeast-optimized
IRESBBa_K1993016 Version 1 (Component)IRES
BBa_K530019BBa_K530019 Version 1 (Component)HHO1 Yeast UTR
attB2-IRESBBa_K1993023 Version 1 (Component)attB2-IRES
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
EMCVBBa_K1442023 Version 1 (Component)EMCV IRES
NKRFBBa_K1442024 Version 1 (Component)NKRF IRES
BBa_K748003BBa_K748003 Version 1 (Component)yddV is a Diguanylate Cyclase-Genomic.
BBa_K530014BBa_K530014 Version 1 (Component)KRE9 Yeast UTR
tFba1BBa_K1829004 Version 1 (Component)tFba1: yeast terminator
tEno2BBa_K1829003 Version 1 (Component)tEno2: Yeast terminator
BBa_K1159300BBa_K1159300 Version 1 (Component)Polioviral Internal Ribosome Entry Site (IRES) for polycistronic expression in eukaryotes
BBa_K530005BBa_K530005 Version 1 (Component)BAP2 Yeast Promoter
BBa_K530015BBa_K530015 Version 1 (Component)FCY2 Yeast Promoter
BBa_K517000BBa_K517000 Version 1 (Component)GAL galactose-inducible yeast promoter
Kozak & stBBa_J63003 Version 1 (Component)designed yeast Kozak sequence
BBa_K575020BBa_K575020 Version 1 (Component)Genomic LasR/PAI1 Inducible Promoter (Long)
IRES-eGFPBBa_K1993034 Version 1 (Component)IRES-eGFP
BBa_K801011BBa_K801011 Version 1 (Component)TEF1 yeast terminator
BBa_K801010BBa_K801010 Version 1 (Component)TEF2 constitutive yeast promoter