iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
mChBBa_J176005 Version 1 (Component)mCh
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
fshPCDBBa_J176002 Version 1 (Component)fshPCD
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
c3BBa_K2027006 Version 1 (Component)Bacterial Collagen with Elastin Cross-linker and Coiled-Coil Heterotrimerization Domain 3
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
c2BBa_K2027005 Version 1 (Component)Bacterial Collagen with Elastin Cross-linker and Coiled-Coil Heterotrimerization Domain 2
c1BBa_K2027004 Version 1 (Component)Bacterial Collagen with Elastin Cross-linker and Coiled-Coil Heterotrimerization Domain 1
VP64BBa_J176013 Version 1 (Component)VP64
cNBBa_K2027003 Version 1 (Component)Bacterial Collagen with Elastin Cross-linker and Homotrimeric Coiled-Coil Domain
s3BBa_K2027038 Version 1 (Component)Bacterial Collagen with Coiled-Coil Heterotrimerization Domain 3
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
s2BBa_K2027037 Version 1 (Component)Bacterial Collagen with Coiled-Coil Heterotrimerization Domain 2
s1BBa_K2027044 Version 1 (Component)Bacterial Collagen with Coiled-Coil Heterotrimerization Domain 1
BBa_K1462502BBa_K1462502 Version 1 (Component)PDZ domain + Linker
PLflexBBa_J176040 Version 1 (Component)PLflex
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_K1462503BBa_K1462503 Version 1 (Component)SH3 domain + Linker
BBa_K2027046BBa_K2027046 Version 1 (Component)Bacterial Collagen with Homotrimeric Coiled-Coil, Elastin Cross-linker, and mRNA Circularization
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
sNBBa_K2027007 Version 1 (Component)Bacterial Collagen with Homotrimeric Coiled-Coil Domain
RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
c1+c2+c3BBa_K2027002 Version 1 (Component)Long Bacterial Collagen Fiber Monomer with Cross-linking Domains
BBa_K165006BBa_K165006 Version 1 (Component)Zif268-HIV DNA-binding domain
BBa_K300002BBa_K300002 Version 1 (Component)Phasin (PhaP) - head domain
s1+s2+s3BBa_K2027045 Version 1 (Component)Long Bacterial Collagen Fiber Monomer without Cross-linking Domains
Fok_aBBa_K243000 Version 1 (Component)Protein domain (active) of the restriction endonuclease FokI
RFC105 CCBBa_K1362419 Version 1 (Component)C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC
Gal4DBBBa_J176020 Version 1 (Component)Gal4 DB