SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

luxr
BBa_C0062 Version 1 (Component)
luxR repressor/activator, (no LVA?)

pSB1C3
pSB1C3 Version 1 (Component)
High copy BioBrick assembly plasmid

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_M36010
BBa_M36010 Version 1 (Component)
Transcription Terminator (Strong)

ComE
BBa_K316016 Version 1 (Component)
ComE transcription factor phosphorylation-activated by ComD

lasr
BBa_C0079 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(+LVA)

COMT
BBa_I742107 Version 1 (Component)
COMT

BBa_K362004
BBa_K362004 Version 1 (Component)
sodA promoter is controlled by some transcription factors including SoxS.

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

lasR
BBa_C0179 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(no LVA)

BBa_K606037
BBa_K606037 Version 1 (Component)
ComS gene for the ComK/ComS system in B. Subtilis

BBa_K346001
BBa_K346001 Version 1 (Component)
RBS (B0034) + MerR (mercury-responsive transcription factor)

ComE
BBa_K1379051 Version 1 (Component)
<i>S. pneumoniae</i> ComE CDS

ComD
BBa_K316015 Version 1 (Component)
ComD receptor for CSP-1 (S. pneumoniae), phosphorylates ComE

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K165010
BBa_K165010 Version 1 (Component)
ADH1 yeast transcription terminator

rbs+COMT
BBa_I742109 Version 1 (Component)
COMT gene with ribosome binding site

rhlR
BBa_C0071 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)

BBa_K606038
BBa_K606038 Version 1 (Component)
ComS gene from the ComK/ComS system in B. Subtilis (codon optimized)

BBa_I746352
BBa_I746352 Version 1 (Component)
delta activator from phiR73 phage

BBa_J31022
BBa_J31022 Version 1 (Component)
comK transcription activator from B. subtilis

cinr
BBa_C0077 Version 1 (Component)
cinR activator from Rhizobium leguminosarum (+LVA)

BBa_M36231
BBa_M36231 Version 1 (Component)
QseB Transcription Factor

rhIR
BBa_C0171 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)

BBa_P10598
BBa_P10598 Version 1 (Component)
GoldenBraid destination vector omega insert

BBa_P10599
BBa_P10599 Version 1 (Component)
GoldenBraid destination vector alpha insert

BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector

BBa_K2092001
BBa_K2092001 Version 1 (Component)
alcR, ethanol-activated transcription factor from A. nidulans

ComX
BBa_K1379004 Version 1 (Component)
<i>S. pneumoniae </i> &#963;^x CDS

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

BBa_M45447
BBa_M45447 Version 1 (Component)
Blue light activated transcription factor

BBa_I746350
BBa_I746350 Version 1 (Component)
ogr activator from P2 phage

BBa_J51000
BBa_J51000 Version 1 (Component)
ComP

BBa_J51001
BBa_J51001 Version 1 (Component)
ComA

ComX
BBa_K1379006 Version 1 (Component)
<i>S. pneumoniae </i> &#963;^x Generator

BBa_M36244
BBa_M36244 Version 1 (Component)
CadC Transcription Factor