Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_I13500BBa_I13500 Version 1 (Component)Screening plasmid intermediate
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_J14466BBa_J14466 Version 1 (Component)Composite part comprised of I6031 and I13600
BBa_J14467BBa_J14467 Version 1 (Component)Composite part comprised of I6032 and I13601
BBa_I13600BBa_I13600 Version 1 (Component)Tet with CFP reporter (without LVA tag)
BBa_I13602BBa_I13602 Version 1 (Component)Tet operator with CFP reporter (with LVA tag) [R/Tc+]
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_J14461BBa_J14461 Version 1 (Component)Composite part comprised of R0051 and I13507
BBa_J14463BBa_J14463 Version 1 (Component)Composite part comprised of J13002 and I13501
BBa_J14458BBa_J14458 Version 1 (Component)Composite part comprised of J04500 and I13401
BBa_J14465BBa_J14465 Version 1 (Component)Composite part comprised of J13002 and I13401
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_J14453BBa_J14453 Version 1 (Component)Composite part comprised of S01022.B0015
BBa_J14451BBa_J14451 Version 1 (Component)Composite part comprised of I13025 and I13026
BBa_J14455BBa_J14455 Version 1 (Component)Composite part comprised of E0030 and B0015
BBa_J14454BBa_J14454 Version 1 (Component)Composite part comprised of E0020 and B0015
BBa_J14457BBa_J14457 Version 1 (Component)Composite part comprised of R0010 and E0422
BBa_I13606BBa_I13606 Version 1 (Component)Reporter Construct (Ty+Lc+)
BBa_I13601BBa_I13601 Version 1 (Component)Lac operator with CFP reporter (without LVA tag) [R/Lc-]
BBa_I13003BBa_I13003 Version 1 (Component)medium RBS, YFP (-LVA), double terminator
BBa_K416004BBa_K416004 Version 1 (Component)Aga2:(Gly3Ser)4 Linker Composite Part
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_I1031BBa_I1031 Version 1 (Component)CI(1) "KISS" asRNA
BBa_I6031BBa_I6031 Version 1 (Component)Promoter O_H Test R0011.E0430
BBa_I13001BBa_I13001 Version 1 (Component)RBS B0030 w/ YFP (-LVA) TT
BBa_I716251BBa_I716251 Version 1 (Component)Composite part consisting of Ptet + RFP
BBa_K195408BBa_K195408 Version 1 (Component)This part is composed of PelB,F10scFv and C-IgAP
BBa_J52015BBa_J52015 Version 1 (Component)composite part
BBa_K182103BBa_K182103 Version 1 (Component)Composite part of K182100 and K182102
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins