BBa_I20250BBa_I20250 Version 1 (Component)Device used to characterize Ribosome Binding Sites through measurement of RFP expression
BBa_I20251BBa_I20251 Version 1 (Component)Device used to characterize Ribosome Binding Sites through measurement of RFP expression
BBa_M1613BBa_M1613 Version 1 (Component)mioC promoter + RBS + GFP + double terminator (standard 10 compatible)
CBDclos(T7BBa_K863112 Version 1 (Component)Cellulose binding domain of C. cellulovorans with T7, RBS, GS-Linker (Freiburg-Standard)
BBa_K1379003BBa_K1379003 Version 1 (Component)P<sub>comFA</sub>-E0240 (Measurement Kit for P<sub>comFA</sub>)
BBa_K1379002BBa_K1379002 Version 1 (Component)P<sub>celA</sub>-E0240 (Measurement Kit for P<sub>celA</sub>)
xis domainBBa_K112203 Version 1 (Component){< xis >} The bacteriophage lambda xis gene without start or stop codons; assembly standard 21
CBDclosBBa_K863111 Version 1 (Component)Cellulose binding domain of C. cellulovorans cellulose binding protein gene (Freiburg-Standard)
CBDcex(T7)BBa_K863102 Version 1 (Component)Cellulose binding Domain of C. Fimi Exoglucanase with T7, RBS, GS-Linker (Freiburg-Standard)
BBa_M1680BBa_M1680 Version 1 (Component)Standard parts assembly for detection of high glucose levels using FAS promoter
xis domainBBa_K112202 Version 1 (Component){xis>} The lambda xis gene with no stop codon; assembly standard 21
BBa_K1791001BBa_K1791001 Version 1 (Component)Standard RBS expressing MS2 Coat protein ribozyme affinity purification (RAP)
BBa_K2066112BBa_K2066112 Version 1 (Component)Synthetic Enhancer Project: Ntr promoter driven NRII2302 (mut) on UNS Standard
GFP_FreibuBBa_K863120 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (Freiburg-Standard)
SBOL Compliant SoftwareSBOLCompliantSoftware_collection Version 1 (Collection)A collection of software that supports the Synthetic Biology Open Language (SBOL) standard
xisBBa_K112205 Version 1 (Component){rbs.xis!} The xis gene with native rbs site and stop codon; assembly standard 21
BBa_K173001BBa_K173001 Version 1 (Component)J23101 measurement system
BBa_K1956026BBa_K1956026 Version 1 (Component)Noise in Device measurement
BBa_K1956025BBa_K1956025 Version 1 (Component)Noise in Device measurement
BBa_K1956024BBa_K1956024 Version 1 (Component)Noise in Device measurement
BBa_K1956027BBa_K1956027 Version 1 (Component)Noise in Device measurement
BBa_K929300BBa_K929300 Version 1 (Component)Potsdam Standard Backbone
BBa_K299800BBa_K299800 Version 1 (Component)standard biobrick scar (if next part starts with ATG)
BBa_K299007BBa_K299007 Version 1 (Component)RBS measurement device J23100 B0032 GFP
BBa_K299029BBa_K299029 Version 1 (Component)RBS measurement device pT7 J61127 GFP
MLSBBa_K1119001 Version 1 (Component)Mitochondrial Leader Sequence with RFC25 standard
BBa_K1051262BBa_K1051262 Version 1 (Component)The measurement pathway of degradation tag K1051208.
BBa_K1051260BBa_K1051260 Version 1 (Component)The measurement pathway of degradation tag K1051206.
BBa_K1051261BBa_K1051261 Version 1 (Component)The measurement pathway of degradation tag K1051207.
BBa_K1484005BBa_K1484005 Version 1 (Component)AmilCP chromoprotein in BBa and MoClo standard
BBa_J95020BBa_J95020 Version 1 (Component)Terminator measurement kit designed for E coli
BBa_K101015BBa_K101015 Version 1 (Component)Standard Promoter with RBS, GFP and terminator
SEGASEGA_collection Version 1 (Collection)In the Standardized Genome Architecture (SEGA), genomic integration of DNA fragments is enabled by λ-Red recombineering and so-called landing pads that are a common concept in synthetic biology and typically contain features that i) enable insertion of additional genetic elements and ii) provide well-characterized functional parts such as promoters and genes, and iii) provides insulation against genome context-dependent effects. The SEGA landing pads allow for reusable homology regions and time-efficient construction of parallel genetic designs with a minimal number of reagents and handling steps. SEGA bricks, typically synthetic DNA or PCR fragments, are integrated on the genome simply by combining the two reagents (i.e. competent cells and DNA), followed by incubation steps, and successful recombinants are identified by visual inspection on agar plates. The design of the SEGA standard was heavily influenced by the Standard European Vector Architecture (SEVA). SEGA landing pads typically hosts two major genetic “control elements” that influence gene expression on the transcriptional (C1), and translational (C2) level. Furthermore, landing pads contain gadgets such as selection and counterselection markers.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.