SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_I4212BBa_I4212 Version 1 (Component)Synchronator design 2, Output-
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_I4213BBa_I4213 Version 1 (Component)Synchronator design 3, Output-
BBa_I4211BBa_I4211 Version 1 (Component)Synchronator design 1, Output-
BBa_I4214BBa_I4214 Version 1 (Component)Synchronator design 4, Output-
BBa_I4202BBa_I4202 Version 1 (Component)Prakash *: Synchronator Design 2
BBa_I4200BBa_I4200 Version 1 (Component)Prakash *: Synchronator Design 4
BBa_I4201BBa_I4201 Version 1 (Component)Prakash *: Synchronator Design 1
BBa_I4203BBa_I4203 Version 1 (Component)Prakash *: Synchronator Design 3
BBa_K264001BBa_K264001 Version 1 (Component)Modular UP-element Design 2
Kozak & stBBa_J63003 Version 1 (Component)designed yeast Kozak sequence
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_I4204BBa_I4204 Version 1 (Component)Prakash *: Syncronator Cell-Signalling Module
BBa_K1886009BBa_K1886009 Version 1 (Component)AND GATE-output-2
BBa_K779106BBa_K779106 Version 1 (Component)Output 2 - mRNA domain 2 DNA sensor MammoBlock
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
BBa_I4002BBa_I4002 Version 1 (Component)Prakash: Design 2
BBa_I13990BBa_I13990 Version 1 (Component)Synchronator 2 w/ CFP under control of Lac (I4202.I13601)
BBa_K592020BBa_K592020 Version 1 (Component)PFixK2-lambda C1-B0034-amilCP blue light sensor output
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
BBa_I6413BBa_I6413 Version 1 (Component)Promoter high output protein generator
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
BBa_K1929300BBa_K1929300 Version 1 (Component)Interleukin-2 (IL-2) with designed RBS
Lin-2BO_9115 Version 1 (Component) BBa_K1341010BBa_K1341010 Version 1 (Component)OUTPUT SYS(GFP)LOGIC GATE IN Graph Theory 2
BBa_K592029BBa_K592029 Version 1 (Component)PcpcG2-B0034-BFP green light sensor output
"Eye 2"BBa_K1080011 Version 1 (Component)ChlI2
2/3GlyBBa_K1362467 Version 1 (Component)other 2/3Gly
BBa_K264010BBa_K264010 Version 1 (Component)Up Element design 2 with constitutive promoter BBa_J23112
BBa_K500001BBa_K500001 Version 1 (Component)lignin degradation 2
Lock 2BBa_J01011 Version 1 (Component)Riboregulator Lock 2
Key 2BBa_J01009 Version 1 (Component)Riboregulator Key 2
BBa_K1399007BBa_K1399007 Version 1 (Component)GFP (mut3b) with SsrA-DAS+2 degradation tag
BBa_K203111BBa_K203111 Version 1 (Component)Constitutive promoter; 2 REU
BBa_K1763440BBa_K1763440 Version 1 (Component)MaSp1/2[1:1]-12(1C3)
BBa_I13513BBa_I13513 Version 1 (Component)Screening Plasmid 2
BBa_I5612BBa_I5612 Version 1 (Component)Brickalator 2.0 (Output-)