Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
GerEBO_11469 Version 1 (Component) BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
UPcox1BBa_K809003 Version 1 (Component)Up elements of cox1 gene
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
COX3 termiBBa_K809005 Version 1 (Component)Terminator of Yeast mitochondrial gene COX3
BBa_K863201BBa_K863201 Version 1 (Component)3' UTR site of alcohol oxidase 1 gene (aox1)
COX1 promoBBa_K809007 Version 1 (Component)Promoter of Yeast mitochondrial gene COX1/Oli1/15s rRNA
BBa_K863200BBa_K863200 Version 1 (Component)5' UTR site of alcohol oxidase 1 gene (aox1)
BBa_K264001BBa_K264001 Version 1 (Component)Modular UP-element Design 2
BBa_K264003BBa_K264003 Version 1 (Component)Modular UP-element Design 4
BBa_K264000BBa_K264000 Version 1 (Component)Modular UP-element Design 1
BBa_K264006BBa_K264006 Version 1 (Component)Modular UP-element Design 7
BBa_K264004BBa_K264004 Version 1 (Component)Modular UP-element Design 5
BBa_K264002BBa_K264002 Version 1 (Component)Modular UP-element Design 3
BBa_K264005BBa_K264005 Version 1 (Component)Modular UP-element Design 6
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
UpBBa_K1642005 Version 1 (Component)Upstream sequence from slr0168
BBa_K264046BBa_K264046 Version 1 (Component)UP Element Design 5 with BBa_J23101
BBa_K264047BBa_K264047 Version 1 (Component)UP Element Design 6 with BBa_J23101
BBa_K264048BBa_K264048 Version 1 (Component)UP Element Design 7 with BBa_J23101
BBa_K264045BBa_K264045 Version 1 (Component)UP Element Design 4 with BBa_J23101
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_J22101BBa_J22101 Version 1 (Component)Lac Y gene
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K809010BBa_K809010 Version 1 (Component)Upstream recombination site of cox3
BBa_K809011BBa_K809011 Version 1 (Component)Dowstream recombination site of cox3
BBa_K177028BBa_K177028 Version 1 (Component)mitochondrial location signal from Cox gene
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)