iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J70519BBa_J70519 Version 1 (Component)formed by cutting J70423 with PsrI and adding annealed J70483 and J70484
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_J70435BBa_J70435 Version 1 (Component)Forward oligo part for testing J70428, J70429, J70430
BBa_J70437BBa_J70437 Version 1 (Component)Reverse oligo part for testing J70428, J70429, J70430
BBa_J70436BBa_J70436 Version 1 (Component)Forward oligo part for testing J70428, J70429, J70430
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J70434BBa_J70434 Version 1 (Component)R0010.J70428.E0020 or J70431.E0020
BBa_J70433BBa_J70433 Version 1 (Component)R0010.J70428.E0030 or J70431.E0030
BBa_J70432BBa_J70432 Version 1 (Component)R0010.J70428.E0040 or J70431.E0040
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_J70427BBa_J70427 Version 1 (Component)R0010.J70400.E0020 or J70406.E0020
BBa_J70426BBa_J70426 Version 1 (Component)R0010.J70400.E0030 or J70406.E0030
BBa_J70024BBa_J70024 Version 1 (Component)TetM gene, recoded compromise E. coli & Mesoplasma florum
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_J70431BBa_J70431 Version 1 (Component)R0010.J70428
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_J70514BBa_J70514 Version 1 (Component)10gfp(J70482).E0040 without intermediate scar?
BBa_I746916BBa_I746916 Version 1 (Component)superfolder GFP coding sequence
eforRedBBa_K592012 Version 1 (Component)eforRed, red chromoprotein
BBa_J70048BBa_J70048 Version 1 (Component)6his part for use with BioScaffold parts ATG-GGATCC (glycine serine)-6 His-TAA
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_J70516BBa_J70516 Version 1 (Component)1000gfp(J70488).E0040 no scar
BBa_J70515BBa_J70515 Version 1 (Component)100gfp(J70485).E0040 no scar
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
BBa_J70485BBa_J70485 Version 1 (Component)gfp RBS, {0,5;15,10} family member - level 100 (master sequence)
BBa_J70488BBa_J70488 Version 1 (Component)gfp RBS, {0,5;15,10} family member - level 1000 (master sequence)
BBa_J70406BBa_J70406 Version 1 (Component)R0010.J70400 (Ribosome Replacer or Tag Adder)
BBa_J70518BBa_J70518 Version 1 (Component)100000gfp(J70494).E0040 no scar
BBa_J70443BBa_J70443 Version 1 (Component)yfp RBS, {0,5;15,10} family member - level 100 (forward oligo)
BBa_J70438BBa_J70438 Version 1 (Component)Part simulated by J70436&7 in combination with J70428,29,&30
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
BBa_J70473BBa_J70473 Version 1 (Component)R0010.B0034.E0030
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J70413BBa_J70413 Version 1 (Component)R0010.E0021.B1007.E0031, Terminator test part for B1007
BBa_J70517BBa_J70517 Version 1 (Component)10000gfp(J70491).E0040 no scar
BBa_J70486BBa_J70486 Version 1 (Component)gfp RBS, {0,5;15,10} family member - level 100 (forward oligo)
BBa_J70631BBa_J70631 Version 1 (Component)R0010-J70630, rbs and maltose binding protein added to J70423