SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K176100BBa_K176100 Version 1 (Component)constitutive promoter family member J23100 (pCon 1.00) with primer VR3 site
BBa_K176099BBa_K176099 Version 1 (Component)constitutive promoter family member J23119 (pCon max) with primer VR10 site
BBa_C100002BBa_C100002 Version 1 (Component)ORF for BAMT odorant enzyme
BBa_C100001BBa_C100001 Version 1 (Component)ORF for SAMT odorant enzyme
BBa_J133701BBa_J133701 Version 1 (Component)primers tail extension SP for BioBricking
BBa_J133700BBa_J133700 Version 1 (Component)primers tail extension EX for BioBricking
BBa_M31535BBa_M31535 Version 1 (Component)This is gene IX of M13K07 (RBS, and ORF)
BBa_M31534BBa_M31534 Version 1 (Component)This is gene VII of M13K07 (RBS, and ORF)
OriT-RP4BBa_K125320 Version 1 (Component)OriT-RP4 (Origin of transfer for the RP4 plasmid)
BBa_C100016BBa_C100016 Version 1 (Component)Oe23 ORF (B0034 optimized)
BBa_C100014BBa_C100014 Version 1 (Component)LMS ORF (B0034 optimized)
BBa_C100015BBa_C100015 Version 1 (Component)LIS ORF (B0034 optimized)
BBa_J119334BBa_J119334 Version 1 (Component)Ammeline Biosensor with Riboswitch M6 prime
BBa_J119343BBa_J119343 Version 1 (Component)Ammeline Biosensor with Riboswitch M6C prime
BBa_E2030BBa_E2030 Version 1 (Component)enhanced version of EYFP, yeast-optimized
BBa_K2082298BBa_K2082298 Version 1 (Component)Modified lacZ promoter with OR1 and OR2 binding sites for cI of 434
R6K oriBBa_K300998 Version 1 (Component)[R6K] Origin of replication (rev)
BBa_J72165BBa_J72165 Version 1 (Component)rbs.DHFR, TrimR
BBa_I20529BBa_I20529 Version 1 (Component)HappyBirthdayDrew ORF
BBa_J36843BBa_J36843 Version 1 (Component)Streptavidin, single-chain dimer + His6 tag (no start codon)
BBa_K497019BBa_K497019 Version 1 (Component)Reverse primer Deinococcus radiodurans bacteriophytochrome gene for insertion after heme oxygenase
BBa_K497016BBa_K497016 Version 1 (Component)Agrobacterium tumefaciens fwd primer for bacteriophytochrome for insertion after heme oxygenase
BBa_J119342BBa_J119342 Version 1 (Component)Ammeline Biosensor with Riboswitch M6C prime (T167C)
BBa_J119335BBa_J119335 Version 1 (Component)Ammeline Biosensor with Riboswitch M6 double prime
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
BBa_K1352010BBa_K1352010 Version 1 (Component)Ag43 autotransporter (ORF)
BBa_J06574BBa_J06574 Version 1 (Component)Construction intermediate: cI857 (Lamda II) with RBS and forward terminator (B0034.J06503.B0014)
BBa_I714032BBa_I714032 Version 1 (Component)OriT-S (Origin of Transfer for the pSC101-plasmid nic region)
Ori+KanBBa_K320004 Version 1 (Component)Origin for Asaia and resistance to Kanamycin
BBa_K909012BBa_K909012 Version 1 (Component)PR promoter with multiple operator sites: cI OR1, cI OR2 and and LacI O1
BBa_M31379BBa_M31379 Version 1 (Component)M13K07 g9 ORF -RBS g8 -ORF g8
BBa_K1413041BBa_K1413041 Version 1 (Component)Mutation of OriVR6Kgamma origin of replication (ori)
BBa_C100006BBa_C100006 Version 1 (Component)ORF for the BEAT odorant enzyme
RBS oprFBBa_K1648047 Version 1 (Component)AvOprF with RBS
BBa_J119339BBa_J119339 Version 1 (Component)Ammeline Fitness Module with Riboswitch M6 prime + ThyA
PhyB-908-(BBa_K365011 Version 1 (Component)Phytochrome B (aa 1-908) linked to a trimer of ClpX (aa 61-425)
PB642(L-C)BBa_K365010 Version 1 (Component)Phytochrome B (aa 1-642) linked to a trimer of ClpX (aa 61-425)
BBa_K1456014BBa_K1456014 Version 1 (Component)Oxygen dependent degradation(ODD) domain from HIF-1a reverse primer with restriction site
BBa_K553003BBa_K553003 Version 1 (Component)constitutive production of LasR trans-activator
BBa_K909013BBa_K909013 Version 1 (Component)PR promoter with multiple operator sites: cI OR1, cI OR2 and TetO1
BBa_M31532BBa_M31532 Version 1 (Component)This is gene X of M13K07 (Promoter, RBS, and ORF)
BBa_M31533BBa_M31533 Version 1 (Component)This is gene V of M13K07 (Promoter, RBS, and ORF)
BBa_M31531BBa_M31531 Version 1 (Component)This is gene II of M13K07 (Promoter, RBS, and ORF)
BBa_K1373003BBa_K1373003 Version 1 (Component)nadE with strong promter and RBS
BBa_K145220BBa_K145220 Version 1 (Component)INVERTED TIMER