Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K112327BBa_K112327 Version 1 (Component){rbs_pelB>} {< xis>}
BBa_K112624BBa_K112624 Version 1 (Component){Pbad}.{rbs_pelB>}.{<phoA>} in BBb
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
rbs.pelBBBa_K112230 Version 1 (Component){rbs.pelB} The pelB leader with native rbs; assembly standard 21
BBa_K112339BBa_K112339 Version 1 (Component){rbs_pelB>} {< xis>}{< phoA!}{< b1006>}
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
xisBBa_K112200 Version 1 (Component){xis!} from bacteriophage lambda; assembly standard 21
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K112329BBa_K112329 Version 1 (Component){rbs_pelB>} {< ligase>}
BBa_K426018BBa_K426018 Version 1 (Component)Pbad{rbs_pelB>},tn5,{NIS!}b1006Tn5 5
BBa_K112334BBa_K112334 Version 1 (Component){rbs_pelB>}{< phoA!}{< b1006>}
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_K112341BBa_K112341 Version 1 (Component){rbs_pelB>} {< ligase>}{< phoA!}{< b1006>}
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
xisBBa_K112204 Version 1 (Component){a~xis!} The bacteriophage lambda xis gene ready to have rbs attached and stop codon; assembly stand
xisBBa_K112001 Version 1 (Component)Xis from bacteriophage lambda, assembly standard 21
xisBBa_K112205 Version 1 (Component){rbs.xis!} The xis gene with native rbs site and stop codon; assembly standard 21
BBa_K112354BBa_K112354 Version 1 (Component){Pbad}{rbs_pelB>}{< phoA!}{< b1006>}
BBa_K426017BBa_K426017 Version 1 (Component)Pbad{rbs_pelB>},zf-,SB100x!b1006sleeping_beauty_5
BBa_K426016BBa_K426016 Version 1 (Component)Pbad{rbs_pelB>},zf+,piggyBac!b1006piggieBac_5
BBa_K112361BBa_K112361 Version 1 (Component){Pbad}{rbs_pelB>} {< ligase>}{< phoA!}{< b1006>}
BBa_K426015BBa_K426015 Version 1 (Component)Pbad{rbs_pelB>}<zf+><piggyBac!b1006piggieBac_5
BBa_K112349BBa_K112349 Version 1 (Component){rbs_pelB>} {< ligase>}{< S-Tag!}{< b1006>}
BBa_K112625BBa_K112625 Version 1 (Component){Pbad}.{rbs_pelB>}.{<phoA>}.{<FLAG!}.{b1006}
BBa_K112621BBa_K112621 Version 1 (Component){Pbad}{rbs_pelB>}{<phoA>}.{<AP!}.{b1006}
BBa_K112622BBa_K112622 Version 1 (Component){Pbad}.{rbs_pelB>}.{<phoA>}.{<HA!}.{b1006}
BBa_K112623BBa_K112623 Version 1 (Component)Pbad . rbs_pelB> . <phoA> . <myc! . b1006
xis domainBBa_K112203 Version 1 (Component){< xis >} The bacteriophage lambda xis gene without start or stop codons; assembly standard 21
BBa_K112369BBa_K112369 Version 1 (Component){Pbad}{rbs_pelB>} {< ligase>}{< S-Tag!}{< b1006>}
BBa_K426021BBa_K426021 Version 1 (Component)Pbad{rbs_pelB>}zf+,FokI+!{rbs2_lamB>},zf-,FokI-!b1006
amyE 5 ISBBa_K143001 Version 1 (Component)5??? Integration Sequence for the amyE locus of B. subtilis
eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag
xis domainBBa_K112202 Version 1 (Component){xis>} The lambda xis gene with no stop codon; assembly standard 21
xis/intBBa_K112132 Version 1 (Component)Xis Int controlled by temperature sensitive
HisBBa_K128005 Version 1 (Component)His affinity tag
YxiSBO_2504 Version 1 (Component) yxiSBO_31863 Version 1 (Component) BclA-HisBBa_K1933000 Version 1 (Component)N-terminal domain of BclA protein fused to 6xHis tag
HisBBa_M0021 Version 1 (Component)Poly-His affinity tag
His-Sc_Si4BBa_K1602030 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein