iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_K300002BBa_K300002 Version 1 (Component)Phasin (PhaP) - head domain
InteinBBa_K300004 Version 1 (Component)Engineered pH-inducible intein (codon optimized for E. coli) - internal domain
BBa_K300009BBa_K300009 Version 1 (Component)PoPS->3OC6HSL sender device
BBa_K300010BBa_K300010 Version 1 (Component)PoPS-based self-inducible device
BBa_K300005BBa_K300005 Version 1 (Component)GFP (Silver Standard Prefix) with terminator
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_K300082BBa_K300082 Version 1 (Component)3OC6HSL inducible phasin generator
BBa_K300084BBa_K300084 Version 1 (Component)Phasins with intein downstream (separated by a flexible protein domain linker)
FurBO_11498 Version 1 (Component) BBa_K300014BBa_K300014 Version 1 (Component)Self-inducible device with J23110
BBa_K300085BBa_K300085 Version 1 (Component)BBa_K300086 construction intermediate
BBa_K300087BBa_K300087 Version 1 (Component)BBa_K300088 construction intermediate
BBa_K300089BBa_K300089 Version 1 (Component)BBa_K300090 construction intermediate
BBa_K300984BBa_K300984 Version 1 (Component)E. coli strain BW25141 (pir+)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K300016BBa_K300016 Version 1 (Component)Self-inducible device with J23116
BBa_K300015BBa_K300015 Version 1 (Component)Self-inducible device with J23114
BBa_K300013BBa_K300013 Version 1 (Component)Self-inducible device with J23106
BBa_K300017BBa_K300017 Version 1 (Component)Self-inducible device with J23118
BBa_K300006BBa_K300006 Version 1 (Component)mOrange with ADH1 transcriptional terminator for yeast
BBa_K300011BBa_K300011 Version 1 (Component)Self-inducible device with J23101
BBa_K300012BBa_K300012 Version 1 (Component)Self-inducible device with J23105
BBa_K300088BBa_K300088 Version 1 (Component)Measurement system for BBa_K300093
BBa_K300024BBa_K300024 Version 1 (Component)Measurement system for K300017 self-inducible device
BBa_K300086BBa_K300086 Version 1 (Component)Measurement system for BBa_K300002
BBa_K300081BBa_K300081 Version 1 (Component)Phasin (PhaP) - internal domain - with flexible protein domain linker upstream
BBa_K300080BBa_K300080 Version 1 (Component)Phasin (PhaP) - internal domain - with flexible protein domain linker downstream
BBa_K200014BBa_K200014 Version 1 (Component)Opiorphin + EK cleavage site + His Tag
BBa_K209084BBa_K209084 Version 1 (Component)PAKA-N-linker-PTEN w/o N
BBa_K300094BBa_K300094 Version 1 (Component)Double phasin separated by a flexible protein domain linker
BBa_K300083BBa_K300083 Version 1 (Component)Phasins (separated by a flexible protein domain linker) with intein downstream
BBa_K130004BBa_K130004 Version 1 (Component)YcdO Export
BBa_K300003BBa_K300003 Version 1 (Component)Phasin (PhaP) - internal domain
BBa_K300019BBa_K300019 Version 1 (Component)Measurement system for K300012 self-inducible device
BBa_K300027BBa_K300027 Version 1 (Component)3OC6HSL sender device with J23106